RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ARL2BPQ9Y2Y0 163 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 SNX13Q9Y5W8 968 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 V9GYQ6 96 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF503-AS2A6NEH8 195 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 FAM171A2A8MVW0 826 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 RAB36O95755 333 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 BMP4P12644 408 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CBR1P16152 277 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CALCRP30988 508 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 APOBEC3AP31941 199 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ARR3P36575 388 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 PTDSS1P48651 473 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 DAP3P51398 398 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 SNRPD2P62316 118 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 MYBPC1Q00872 1141 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CHRNB3Q05901 458 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 TNK1Q13470 666 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 TRAM2Q15035 370 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ETFDHQ16134 617 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 GSG1Q2KHT4 349 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 C8orf82Q6P1X6 216 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF730Q6ZMV8 503 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 MYPOPQ86VE0 399 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CCDC36Q8IYA8 594 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 SYT14Q8NB59 555 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 MOSPD2Q8NHP6 518 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 TMEM54Q969K7 222 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 BPIFA2Q96DR5 249 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 LRRC37BQ96QE4 947 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 CRNNQ9UBG3 495 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 ABCD2Q9UBJ2 740 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 RPS6KA6Q9UK32 745 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 PMF1-BGLAPU3KQ54 211 aa10.07□□□□□ -0.8
SMARCE1-203ENST00000377808 HEATR1Q9H583 2144 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 DCTN3O75935 186 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 FARS2O95363 451 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 IGKV3-15P01624 115 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 QDPRP09417 244 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 PGA4P0DJD7 388 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 PGA3P0DJD8 388 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 ALG10Q5BKT4 473 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 GLYATQ6IB77 296 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 C11orf71Q6IPW1 123 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 KRT80Q6KB66 452 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 NHLRC1Q6VVB1 395 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 RRM2BQ7LG56 351 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 HDDC2Q7Z4H3 204 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 NRMQ8IXM6 262 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 OFCC1Q8IZS5 231 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 FAM156AQ8NDB6 213 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 MAPK1IP1LQ8NDC0 245 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 NOXO1Q8NFA2 376 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF347Q96SE7 839 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 CA10Q9NS85 328 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 TAGLN3Q9UI15 199 aa10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 FAM32AQ9Y421 112 aaKnown RBP10.06□□□□□ -0.8
SMARCE1-203ENST00000377808 MAP1AP78559 2803 aaPredicted RBP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 FLNAP21333 2647 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 TRAV27A0A087WT01 109 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 IGHV2OR16-5A0A0B4J2B6 119 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 EFCAB9A8MZ26 197 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 hCG_2039718K7EN88 272 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 DHHO43323 396 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 TRMUO75648 421 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 UBL3O95164 117 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 LY6G6DO95868 133 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 IGLV1-44P01699 117 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 OR4A8P0C604 315 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 FUT4P22083 530 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 SERPINF1P36955 418 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 GPR4P46093 362 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 GIPRP48546 466 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF84P51523 738 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 LSM11P83369 360 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 RUNX1T1Q06455 604 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 CD47Q08722 323 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 LAPTM4AQ15012 233 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 C3orf36Q3SXR2 165 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 FGD3Q5JSP0 725 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 GKAP1Q5VSY0 366 aaPredicted RBP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 IGFN1Q86VF2 1251 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 CDK20Q8IZL9 346 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 OR4F15Q8NGB8 312 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 OR51A7Q8NH64 312 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 ASB10Q8WXI3 467 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 MCHR2Q969V1 340 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 SH3GL3Q99963 347 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 VRK1Q99986 396 aaPredicted RBP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 GRIP2Q9C0E4 1043 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 RNF121Q9H920 327 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 NOX3Q9HBY0 568 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 ARL8BQ9NVJ2 186 aa10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 SAMD4AQ9UPU9 718 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-203ENST00000377808 ACANP16112 2415 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 VSTM5A8MXK1 200 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 FFAR1O14842 300 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms