RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TBX19O60806 448 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SC5DO75845 299 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 AK1P00568 194 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 IL9P15248 144 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 P2RX1P51575 399 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GAS1P54826 345 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DLX5P56178 289 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TDGQ13569 410 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KLHL15Q96M94 604 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PLEKHA1Q9HB21 404 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 COPS7AQ9UBW8 275 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EPHA6Q9UF33 1036 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EMC9Q9Y3B6 208 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM235A6NFC5 223 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 AANATQ16613 207 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C9orf50Q5SZB4 431 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CA13Q8N1Q1 262 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM185AQ8NFB2 350 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR4S1Q8NGB4 309 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR51Q1Q8NH59 317 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ASF1BQ9NVP2 202 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR5V1Q9UGF6 321 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KIF26BQ2KJY2 2108 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 A0A0B4J2E0 115 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 A0A1B0GX12 115 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR14I1A6ND48 311 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF705EA8MWA4 302 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 HTR3BO95264 441 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CD14P08571 375 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PI3P19957 117 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TPMTP51580 245 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MAP2K6P52564 334 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PRPS1P60891 318 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ETFDHQ16134 617 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC6A19Q695T7 634 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RASGRP3Q8IV61 690 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 INO80EQ8NBZ0 244 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KTI12Q96EK9 354 aaPredicted RBP13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 S100A13Q99584 98 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C2orf42Q9NWW7 574 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GDE1Q9NZC3 331 aa13.12□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GPR89AB7ZAQ6 455 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NPIPA5E9PKD4 350 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DCTN6O00399 190 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KCNAB3O43448 404 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GPR89BP0CG08 455 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GFERP55789 205 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RPS15P62841 145 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PSG6Q00889 435 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RPL18Q07020 188 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PUDPQ08623 228 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 VWA2Q5GFL6 755 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FAM69AQ5T7M9 428 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DMKNQ6E0U4 476 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMPRSS11FQ6ZWK6 438 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NUP54Q7Z3B4 507 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NXF5Q9H1B4 397 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GHITMQ9H3K2 345 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MLXQ9UH92 298 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NPIPA1Q9UND3 350 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 B8ZZF3 427 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SCGB1D2O95969 90 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TPOP07202 933 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 UBXN2BQ14CS0 331 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PRAMEF8Q5VWM4 474 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PRAMEF7Q5VXH5 474 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GLT8D1Q68CQ7 371 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FCRL6Q6DN72 434 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CD200R1LQ6Q8B3 271 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TSSK4Q6SA08 328 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FAM71F1Q96KD3 344 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MRGPRX1Q96LB2 322 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 METTL8Q9H825 291 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MPDZO75970 2070 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TRAV8-7A0A075B6U6 113 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DISC1C4P0D8 188 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GABARAPH6UMI1 98 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CBX7O95931 251 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RIDAP52758 137 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 COX15Q7KZN9 410 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 BCORP1Q8N888 145 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C10orf90Q96M02 699 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TSNAXQ99598 290 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLCO1C1Q9NYB5 712 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FBXL21Q9UKT6 434 aa13.11□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GBF1Q92538 1859 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms