RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 FAM214BQ7L5A3 538 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 C9orf106Q8NAJ2 232 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 FBLIM1Q8WUP2 373 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 HDAC2Q92769 488 aaKnown RBP20.34■□□□□ 0.85
HLA-C-202ENST00000376237 ZNF775Q96BV0 537 aaPredicted RBP20.34■□□□□ 0.85
HLA-C-202ENST00000376237 OR2M2Q96R28 347 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 CLN6Q9NWW5 311 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 CLEC4AQ9UMR7 237 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 LRCH1Q9Y2L9 728 aa20.34■□□□□ 0.85
HLA-C-202ENST00000376237 M0R129 80 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 SLC43A1O75387 559 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 PGA4P0DJD7 388 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 PGA3P0DJD8 388 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 AGTR1P30556 359 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 PER3P56645 1201 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 CLRN1P58418 232 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 RUNX1T1Q06455 604 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 CAMK2DQ13557 499 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 OCLNQ16625 522 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 NXNL2Q5VZ03 156 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 SEM1Q6ZVN7 128 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 CXXC5Q7LFL8 322 aaKnown RBP20.33■□□□□ 0.85
HLA-C-202ENST00000376237 CPOQ8IVL8 374 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 TMEM123Q8N131 208 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 RBP7Q96R05 134 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 TTYH2Q9BSA4 534 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 HINT3Q9NQE9 182 aaKnown RBP20.33■□□□□ 0.85
HLA-C-202ENST00000376237 H2AFY2Q9P0M6 372 aaPredicted RBP20.33■□□□□ 0.85
HLA-C-202ENST00000376237 TINAGQ9UJW2 476 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 EMC9Q9Y3B6 208 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 GTF3C1Q12789 2109 aa20.33■□□□□ 0.85
HLA-C-202ENST00000376237 SLC22A23A1A5C7 686 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 OR6C68A6NDL8 312 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 SELENOPP49908 381 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 SLC25A1P53007 311 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 CDK5R2Q13319 367 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 GUSBP1Q15486 140 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 THEM4Q5T1C6 240 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 PLBD1Q6P4A8 553 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 CYB561A3Q8NBI2 242 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 NOXO1Q8NFA2 376 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 PTP4A1Q93096 173 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 BBC3Q96PG8 261 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-202ENST00000376237 SYT4Q9H2B2 425 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 SH3D21A4FU49 640 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 FAM183AA6NL82 134 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 SNTNA6NMZ2 147 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 E9PLN8 166 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 CRABP1P29762 137 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 NTF4P34130 210 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 CSNK1A1P48729 337 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 HIST3H3Q16695 136 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 AADACL4Q5VUY2 407 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 TMEM211Q6ICI0 200 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 GID4Q8IVV7 300 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 SYT14Q8NB59 555 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 OR2T4Q8NH00 348 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 RFKQ969G6 155 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 OTULINQ96BN8 352 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 VKORC1Q9BQB6 163 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 NMNAT2Q9BZQ4 307 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 FKBP7Q9Y680 259 aa20.32■□□□□ 0.84
HLA-C-202ENST00000376237 KMT2BQ9UMN6 2715 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-202ENST00000376237 B8ZZF3 427 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 GLI4P10075 376 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 CEACAM8P31997 349 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-202ENST00000376237 CA7P43166 264 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 LGALS3BPQ08380 585 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 DNM1P34Q6PK57 102 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 C20orf196Q8IYI0 205 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 GCNT2Q8N0V5 402 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 OR6N1Q8NGY5 312 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 TMEM54Q969K7 222 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 APH1AQ96BI3 265 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 RPRD1BQ9NQG5 326 aaKnown RBP20.31■□□□□ 0.84
HLA-C-202ENST00000376237 GLTPQ9NZD2 209 aa20.31■□□□□ 0.84
HLA-C-202ENST00000376237 FOXD3Q9UJU5 478 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-202ENST00000376237 H7C1C5 153 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 PRODHO43272 600 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 CXCR4P61073 352 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 LCN6P62502 163 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 CSNK2BP67870 215 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 RIPPLY2Q5TAB7 128 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 CARD17Q5XLA6 110 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 C3P1Q6ZMU1 363 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 WDFY1Q8IWB7 410 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 POMGNT2Q8NAT1 580 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 GALNT11Q8NCW6 608 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 OR6K3Q8NGY3 331 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 CNIH3Q8TBE1 160 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 APH1BQ8WW43 257 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 LINC00470Q9BZP3 86 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 B3GAT2Q9NPZ5 323 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 ASB6Q9NWX5 421 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-C-202ENST00000376237 MOKQ9UQ07 419 aa20.3■□□□□ 0.84
HLA-C-202ENST00000376237 IGSF10Q6WRI0 2623 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 TRGV8A0A0C4DH27 118 aa20.29■□□□□ 0.84
HLA-C-202ENST00000376237 WBP4O75554 376 aaKnown RBP20.29■□□□□ 0.84
HLA-C-202ENST00000376237 TOXO94900 526 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms