RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 A8MVM7 634 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF749O43361 778 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 PPP3CBP16298 524 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 AADACP22760 399 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 TAZQ16635 292 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 MBOAT2Q6ZWT7 520 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 LACC1Q8IV20 430 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 FAM174AQ8TBP5 190 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 FAM103A1Q9BTL3 118 aaKnown RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 MYH7BA7E2Y1 1941 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 GABREP78334 506 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 FOXK2Q01167 660 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 PAPD4Q6PIY7 484 aaKnown RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF595Q8IYB9 648 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 OR51A4Q8NGJ6 313 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 OR51A2Q8NGJ7 313 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 NTNG1Q9Y2I2 539 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 SLC22A7Q9Y694 548 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 SPEF2Q9C093 1822 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ANKRD61A6NGH8 418 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF732B4DXR9 585 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 RAB40ALP0C0E4 278 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 HTR4Q13639 388 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ZNF534Q76KX8 674 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 GDF7Q7Z4P5 450 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 RAB40AQ8WXH6 277 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CPPED1Q9BRF8 314 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 SEMA4GQ9NTN9 838 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 A0A1B0GWA3 101 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ALPLP05186 524 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 TRHRP34981 398 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 TAGLN2P37802 199 aaKnown RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 INHBCP55103 352 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 DMWDQ09019 674 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 PMPCAQ10713 525 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 YRDCQ86U90 279 aaKnown RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CMTM2Q8TAZ6 248 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 COA3Q9Y2R0 106 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 UGT2A1Q9Y4X1 527 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 BLACEA4D250 179 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A6P0DMU7 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A5P0DMU8 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A7P0DMV0 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A8P0DMV1 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A9P0DMV2 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 EN2P19622 333 aaPredicted RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 BCL6P41182 706 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 RAB11AP62491 216 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 TRA2BP62995 288 aaKnown RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A2Q5DJT8 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A1Q5HYN5 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 TRILQ7L0X0 811 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 RBM45Q8IUH3 476 aaKnown RBP12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CPXM2Q8N436 756 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 CT45A3Q8NHU0 189 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 ABHD6Q9BV23 337 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 GLIPR2Q9H4G4 154 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 INPP5EQ9NRR6 644 aa12.65□□□□□ -0.38
COL4A1-201ENST00000375820 LGALS8O00214 317 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 ARNTLO00327 626 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 IL1AP01583 271 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 THBS3P49746 956 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 SLC35A1P78382 337 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 TLE4Q04727 773 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 PRTGQ2VWP7 1150 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 GLIPR1L1Q6UWM5 242 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 DEFB108BQ8NET1 73 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 OR2M2Q96R28 347 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 CDCA3Q99618 268 aaPredicted RBP12.64□□□□□ -0.39
COL4A1-201ENST00000375820 PRPH2P23942 346 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 SLC7A9P82251 487 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 RTL6Q6ICC9 239 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 CORO6Q6QEF8 472 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 SMAP2Q8WU79 429 aaPredicted RBP12.64□□□□□ -0.39
COL4A1-201ENST00000375820 THOC3Q96J01 351 aaKnown RBP12.64□□□□□ -0.39
COL4A1-201ENST00000375820 MKRN2Q9H000 416 aaKnown RBP12.64□□□□□ -0.39
COL4A1-201ENST00000375820 K7ESM1 405 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 GUSBP08236 651 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 HSD17B7P56937 341 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 CLDN10P78369 228 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 FCRL1Q96LA6 429 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 SEMA4CQ9C0C4 833 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 C20orf85Q9H1P6 137 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 EMC7Q9NPA0 242 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 FAM212BQ9NTI7 297 aaPredicted RBP12.64□□□□□ -0.39
COL4A1-201ENST00000375820 OBP2AQ9NY56 170 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 KRBOX1C9JBD0 128 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 H0Y8X5 98 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 KCNK2O95069 426 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
COL4A1-201ENST00000375820 OR13H1Q8NG92 308 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms