RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GPR34Q9UPC5 381 aa11.11□□□□□ -0.63
C9orf3-203ENST00000375315 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 TMEM272A0A1B0GTI8 110 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 GGT3PA6NGU5 568 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 FAM183AA6NL82 134 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 DLSTP36957 453 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 RAB4BP61018 213 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 METRNLQ641Q3 311 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 MED27Q6P2C8 311 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PLBD1Q6P4A8 553 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 FAM199XQ6PEV8 388 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-203ENST00000375315 IL34Q6ZMJ4 242 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 MEPCEQ7L2J0 689 aaKnown RBP11.1□□□□□ -0.63
C9orf3-203ENST00000375315 TMEFF1Q8IYR6 380 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 OR13C5Q8NGS8 318 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 C4orf36Q96KX1 117 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PGLYRP3Q96LB9 341 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 CAMK1GQ96NX5 476 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 TIMP4Q99727 224 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 TMEM231Q9H6L2 316 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 SEMA4GQ9NTN9 838 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 SCN3AQ9NY46 2000 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 C9orf170A2RU37 121 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 OR5H14A6NHG9 310 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 NPIPB9F8W1W9 429 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PPM1DO15297 605 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 OR2T1O43869 369 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 SLC2A10O95528 541 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PDGFBP01127 241 aaPredicted RBP11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PRG2P13727 222 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PPP2R1BP30154 601 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PTGER1P34995 402 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 PTH2RP49190 550 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 SRSF3P84103 164 aaKnown RBP11.1□□□□□ -0.63
C9orf3-203ENST00000375315 OR10H5Q8NGA6 315 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 SLC6A16Q9GZN6 736 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 GFOD1Q9NXC2 390 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 P2RX2Q9UBL9 471 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 BDP1A6H8Y1 2624 aa11.1□□□□□ -0.63
C9orf3-203ENST00000375315 RAB40ALP0C0E4 278 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NT5EP21589 574 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RBP2P50120 134 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 BEX5Q5H9J7 111 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 DMKNQ6E0U4 476 aaPredicted RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 OR52W1Q6IF63 320 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 FAM129CQ86XR2 697 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 CCDC107Q8WV48 283 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RAB3CQ96E17 227 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 DERL3Q96Q80 235 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 C19orf43Q9BQ61 176 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NRIP2Q9BQI9 281 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 ICKQ9UPZ9 632 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 CD8AP01732 235 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NR2F1P10589 423 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 SLC25A4P12235 298 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 ITGA3P26006 1051 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 PYCR1P32322 319 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 PJVKQ0ZLH3 352 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 GFOD2Q3B7J2 385 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 PRRT3Q5FWE3 981 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 C11orf87Q6NUJ2 197 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NIPAL3Q6P499 406 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RPTNQ6XPR3 784 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 FCRLAQ7L513 359 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 SSX6Q7RTT6 188 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 C6orf120Q7Z4R8 191 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 GJD3Q8N144 294 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 OR6N1Q8NGY5 312 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 DUSP19Q8WTR2 217 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 SLC25A38Q96DW6 304 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 CPNE2Q96FN4 548 aaPredicted RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 HSPA12BQ96MM6 686 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 MRPS30Q9NP92 439 aaKnown RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RCC2Q9P258 522 aaKnown RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 C5AR2Q9P296 337 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 MOKQ9UQ07 419 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 HMGN4O00479 90 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 OR1F1O43749 312 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RBBP9O75884 186 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NDUFB7P17568 137 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 CPT2P23786 658 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 BUD31P41223 144 aaPredicted RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 MANFP55145 182 aaKnown RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 RNF4P78317 190 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 TAF8Q7Z7C8 310 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 C17orf64Q86WR6 236 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 MMP21Q8N119 569 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 LINC01555Q8NAE3 123 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 OR5P2Q8WZ92 322 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 OR2M4Q96R27 311 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
C9orf3-203ENST00000375315 NAA11Q9BSU3 229 aaPredicted RBP11.09□□□□□ -0.63
C9orf3-203ENST00000375315 TSPAN10Q9H1Z9 355 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms