RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 UTS2O95399 124 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 EIF4EP06730 217 aaKnown RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 EPHA1P21709 976 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 NKX6-1P78426 367 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 ACSM1Q08AH1 577 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 FAM57BQ71RH2 274 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 ADGRE4PQ86SQ3 457 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SYS1Q8N2H4 156 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SLC22A24Q8N4F4 322 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 OR13C5Q8NGS8 318 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SLAMF9Q96A28 289 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 HHIPL1Q96JK4 782 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF578Q96N58 590 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SLC46A1Q96NT5 459 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 VN1R3Q9BXE9 311 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 LYRM4Q9HD34 91 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 AGAP14A8MT82 685 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 PRRT4C9JH25 899 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 GMDSO60547 372 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 PLA2G7Q13093 441 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF77Q15935 545 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 FAM27D1Q5T7N8 215 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 GLCCI1Q86VQ1 547 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 LINC00346Q8IVM7 164 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 GOT1L1Q8NHS2 421 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SMIM19Q96E16 107 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 ARSGQ96EG1 525 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 CNRIP1Q96F85 164 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 CMSS1Q9BQ75 279 aaKnown RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 KCNIP1Q9NZI2 227 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SLC23A2Q9UGH3 650 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 MED16Q9Y2X0 877 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 TMED7-TICAM2A0A0A6YYA0 188 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 FTCDNL1E5RQL4 147 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 P2RY10O00398 339 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SGCEO43556 437 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 STK17BO94768 372 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 SLC34A2O95436 690 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 DBHP09172 617 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 CD22P20273 847 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 HOXA9P31269 272 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 DIO1P49895 249 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 Q6ZNB5 142 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 COMTD1Q86VU5 262 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 TCTE3Q8IZS6 198 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 OR5D18Q8NGL1 313 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 OR10R2Q8NGX6 335 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 FAM212BQ9NTI7 297 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 MRPS28Q9Y2Q9 187 aaKnown RBP10.61□□□□□ -0.71
PTCH1-203ENST00000375274 TMED7Q9Y3B3 224 aa10.61□□□□□ -0.71
PTCH1-203ENST00000375274 AIPO00170 330 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 MELKQ14680 651 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CDK5R1Q15078 307 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CNN3Q15417 329 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 SLC36A2Q495M3 483 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 MANEAQ5SRI9 462 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FAM122BQ7Z309 247 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 RCBTB1Q8NDN9 531 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 OR1E3Q8WZA6 343 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CNTNAP3Q9BZ76 1288 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 ULBP2Q9BZM5 246 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 LRIT1Q9P2V4 623 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 TBC1D29Q9UFV1 150 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CA14Q9ULX7 337 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FAM186AA6NE01 2351 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 ANKRD61A6NGH8 418 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 IFITM5A6NNB3 132 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 BRINP1O60477 761 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 ZFAND5O76080 213 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 SOD1P00441 154 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 APEHP13798 732 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 SPI1P17947 270 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CD38P28907 300 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 BLVRBP30043 206 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF93P35789 620 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 NUDT1P36639 197 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 C12orf73Q69YU5 71 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 MRPL21Q7Z2W9 205 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 NKAIN3Q8N8D7 197 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 OR14A16Q8NHC5 309 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 CGGBP1Q9UFW8 167 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 TRIP11Q15643 1979 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FGF17O60258 216 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 AFF3P51826 1226 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 SELENOVP59797 346 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 EXOSC2Q13868 293 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 EBPQ15125 230 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 LPCAT3Q6P1A2 487 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 RNF165Q6ZSG1 346 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 ZNF683Q8IZ20 524 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 MARC2Q969Z3 335 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 FGGYQ96C11 551 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 MAP3K3Q99759 626 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 PLA2G12AQ9BZM1 189 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 NKX2-4Q9H2Z4 354 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 ISG20L2Q9H9L3 353 aaKnown RBP10.6□□□□□ -0.71
PTCH1-203ENST00000375274 A0A0B4J203 849 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 RPS10-NUDT3A0A1W2PQS6 291 aa10.6□□□□□ -0.71
PTCH1-203ENST00000375274 PPM1DO15297 605 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms