RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MEX3BQ6ZN04 569 aaKnown RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 STACQ99469 402 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 SMIM3Q9BZL3 60 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TBX21Q9UL17 535 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 SOWAHBA6NEL2 793 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 F5H5K5 113 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 GSTZ1O43708 216 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 ORM1P02763 201 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 OR4Q2P0C623 313 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 SNRPBP14678 240 aaKnown RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 ARRB1P49407 418 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 LTB4RQ15722 352 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 POMZP3Q6PJE2 187 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 OR5B3Q8NH48 314 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ARHGAP9Q9BRR9 750 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ELOVL3Q9HB03 270 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 MRPL3P09001 348 aaKnown RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 TRAPPC6BQ86SZ2 158 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 WDR89Q96FK6 387 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 MS4A3Q96HJ5 214 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 KCNJ15Q99712 375 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 G3V3Y1 287 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 FOXE1O00358 373 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 LIMS3P0CW19 117 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 LIMS4P0CW20 117 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 SBSNQ6UWP8 590 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 C11orf42Q8N5U0 333 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 CA5BP1Q8WTZ4 195 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 C1orf226A1L170 272 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ZFP92A6NM28 416 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 GPX2P18283 190 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 SUOXP51687 545 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ESPNLQ6ZVH7 1005 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 PGAM5Q96HS1 289 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 LRIG1Q96JA1 1093 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TRAPPC2LQ9UL33 140 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 PSAT1Q9Y617 370 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 RECQL4O94761 1208 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TNFSF4P23510 183 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 MSX1P28360 303 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 CSF2RBP32927 897 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TESK1Q15569 626 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TAF1CQ15572 869 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 AGTRAPQ6RW13 159 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TAS1R3Q7RTX0 852 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TPPP3Q9BW30 176 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 A2ML1A8K2U0 1454 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 EIF3GO75821 320 aaKnown RBP eCLIP6.13□□□□□ -1.43
UBR4-204ENST00000375254 SORBS2O94875 1100 aaKnown RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 LRRC25Q8N386 305 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 MSLNLQ96KJ4 702 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ELOVL1Q9BW60 279 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ABI3Q9P2A4 366 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 PXDNLA1KZ92 1463 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 C2orf72A6NCS6 295 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 MPIG6BO95866 241 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ZNF43P17038 809 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 BRS3P32247 399 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 DPH2Q9BQC3 489 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 RIMS4Q9H426 269 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 SIRT3Q9NTG7 399 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 FBXO34Q9NWN3 711 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TCFL5Q9UL49 500 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 RBFOX3A6NFN3 312 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TRAPPC2LH3BP13 241 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 HOXA11P31270 313 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 LSRQ86X29 649 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 ADAMTS18Q8TE60 1221 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 SELENOIQ9C0D9 397 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 OPN3Q9H1Y3 402 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 ZNF256Q9Y2P7 627 aaPredicted RBP6.13□□□□□ -1.43
UBR4-204ENST00000375254 SYN3O14994 580 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ZNF728P0DKX0 622 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 ARRB2P32121 409 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 LHX4Q969G2 390 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TOPBP1Q92547 1522 aa6.13□□□□□ -1.43
UBR4-204ENST00000375254 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 A6NJY4 79 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 B4E171 279 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 YIF1AO95070 293 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CTSEP14091 401 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TMEM225Q6GV28 225 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 DRAM2Q6UX65 266 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 IL22RA1Q8N6P7 574 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 OR52I2Q8NH67 350 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 OR5M11Q96RB7 305 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ASIC5Q9NY37 505 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PPP1CBP62140 327 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SOWAHCQ53LP3 525 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 CPA6Q8N4T0 437 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TMEM229BQ8NBD8 167 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 DDA1Q9BW61 102 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CLCF1Q9UBD9 225 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 A0A1B0GTW7 788 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRICKLE3O43900 615 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 HAND1O96004 215 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 DOC2BQ14184 412 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 THNSL2Q86YJ6 484 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 BEND2Q8NDZ0 799 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms