RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TRMT1LQ7Z2T5 733 aaKnown RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 ARL14EPQ8N8R7 260 aaPredicted RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 BPIFB6Q8NFQ5 453 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 OR9Q2Q8NGE9 314 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 OR52L2PQ8NGH6 319 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 OR5M9Q8NGP3 310 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 SMARCD2Q92925 531 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 NUDT22Q9BRQ3 303 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 SLC46A2Q9BY10 475 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 FAM124BQ9H5Z6 455 aaPredicted RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 MSL2Q9HCI7 577 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 ACP6Q9NPH0 428 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 COPS7AQ9UBW8 275 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 SLC25A10Q9UBX3 287 aaPredicted RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 ZNF391Q9UJN7 358 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 NDRG4Q9ULP0 352 aaKnown RBP7.21□□□□□ -1.25
USP48-203ENST00000374732 TNFSF18Q9UNG2 199 aa7.21□□□□□ -1.25
USP48-203ENST00000374732 A0A1W2PR48 441 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 PRR19A6NJB7 356 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 KIAA1324LA8MWY0 1029 aaPredicted RBP7.21□□□□□ -1.26
USP48-203ENST00000374732 AP4M1O00189 453 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 SLC16A5O15375 505 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 CD2P06729 351 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 SELEP16581 610 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 SLC6A4P31645 630 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 RAB28P51157 221 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 C2orf80Q0P641 193 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 ZP4Q12836 540 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 CCNIQ14094 377 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 ABRAXAS2Q15018 415 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 UNC50Q53HI1 259 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 FAM182AQ5T1J6 154 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 PEAR1Q5VY43 1037 aaPredicted RBP7.21□□□□□ -1.26
USP48-203ENST00000374732 YAF2Q8IY57 180 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 DTWD2Q8NBA8 298 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 TSTD1Q8NFU3 115 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 OR4C5Q8NGB2 326 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 OR4P4Q8NGL7 312 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 OR1L4Q8NGR5 311 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 GPR20Q99678 358 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 INPP5KQ9BT40 448 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 CDCA4Q9BXL8 241 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 MEGF9Q9H1U4 602 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 CST9LQ9H4G1 147 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 BEX1Q9HBH7 125 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 POPDC2Q9HBU9 364 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 APOBEC3GQ9HC16 384 aaKnown RBP7.21□□□□□ -1.26
USP48-203ENST00000374732 SCN3BQ9NY72 215 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 COMMD3Q9UBI1 195 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 FBXW11Q9UKB1 542 aa7.21□□□□□ -1.26
USP48-203ENST00000374732 CSDC2Q9Y534 153 aaKnown RBP7.21□□□□□ -1.26
USP48-203ENST00000374732 CGB1A6NKQ9 187 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 PPP1R2P9O14990 202 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ZNF35P13682 527 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 PRDX2P32119 198 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 RPL21P46778 160 aaKnown RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 SP4Q02446 784 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 EMX1Q04741 257 aaPredicted RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 HIST2H2ACQ16777 129 aaPredicted RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 ASCL5Q7RTU5 278 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 C5orf24Q7Z6I8 188 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 JAGN1Q8N5M9 183 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 COQ8AQ8NI60 647 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 SLC7A13Q8TCU3 470 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ADAMTS17Q8TE56 1095 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ASB10Q8WXI3 467 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 SORCS1Q8WY21 1168 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 EID2BQ96D98 161 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ITCHQ96J02 903 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ZBTB45Q96K62 511 aaPredicted RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 SLC6A18Q96N87 628 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ASPNQ9BXN1 380 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 FAM83DQ9H4H8 585 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 WDR76Q9H967 626 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 TM7SF3Q9NS93 570 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 GAR1Q9NY12 217 aaKnown RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 ADAM29Q9UKF5 820 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 VPREB3Q9UKI3 123 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 UBQLN1Q9UMX0 589 aaKnown RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 FZD1Q9UP38 647 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 PRSS21Q9Y6M0 314 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 PTPRJQ12913 1337 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ZSWIM8A7E2V4 1837 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ZBTB42B2RXF5 422 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 MAN2B1O00754 1011 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 RGS16O15492 202 aaPredicted RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 RS1O15537 224 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 VENTXO95231 258 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 FADS2O95864 444 aaKnown RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 HOXB5P09067 269 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 EPXP11678 715 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 RAB7AP51149 207 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 TMPRSS3P57727 454 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 OR2B8PP59922 312 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 HSD11B2P80365 405 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 MC2RQ01718 297 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 LAMTOR4Q0VGL1 99 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 TAF9Q16594 264 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 TPTE2P1Q5T6R2 138 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms