RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 REV1Q9UBZ9 1251 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 IL20RAQ9UHF4 553 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 OAZ3Q9UMX2 235 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 ADAM18Q9Y3Q7 739 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 DOPEY2Q9Y3R5 2298 aa13.23□□□□□ -0.29
HSPG2-201ENST00000374673 A6NIZ1 184 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 IMPA2O14732 288 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ARPC3O15145 178 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 SDHAP31040 664 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ACVR1BP36896 505 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 DAPP51397 102 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 FOXG1P55316 489 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 RAP1BP61224 184 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 RAP1AP62834 184 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ROR2Q01974 943 aaKnown RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 RUNX1T1Q06455 604 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 STK11Q15831 433 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 HIST3H3Q16695 136 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 DMRTC2Q8IXT2 367 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ICA1LQ8NDH6 482 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 OR8D4Q8NGM9 314 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 FNDC8Q8TC99 324 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 MAGEE2Q8TD90 523 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 KISS1RQ969F8 398 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 BOD1Q96IK1 185 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 Q96M85 177 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 KCNK17Q96T54 332 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ALG12Q9BV10 488 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 OSBPL10Q9BXB5 764 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 GPR35Q9HC97 309 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 GLTPQ9NZD2 209 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 KIF17Q9P2E2 1029 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 PLEKHB1Q9UF11 243 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 IER3IP1Q9Y5U9 82 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 ALPK2Q86TB3 2170 aa13.22□□□□□ -0.29
HSPG2-201ENST00000374673 GCN1Q92616 2671 aaKnown RBP13.22□□□□□ -0.29
HSPG2-201ENST00000374673 TEX13CA0A0J9YWL9 993 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 M0R3G1 203 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 BHLHE40O14503 412 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 IDH3BO43837 385 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 LYZL6O75951 148 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 SOX14O95416 240 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 PPP1R3DO95685 299 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 NR2C1P13056 603 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 OSMP13725 252 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 IL32P24001 234 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 ZNF133P52736 654 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 CLRN1P58418 232 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 ELF3P78545 371 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 KRR1Q13601 381 aaKnown RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 CEACAM16Q2WEN9 425 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 MESTQ5EB52 335 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 ANKRD34AQ69YU3 496 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 BHLHA15Q7RTS1 189 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 PARP8Q8N3A8 854 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 C1orf162Q8NEQ5 155 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 STEAP2Q8NFT2 490 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 SPOCK3Q9BQ16 436 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 USB1Q9BQ65 265 aaKnown RBP13.21□□□□□ -0.29
HSPG2-201ENST00000374673 IFT27Q9BW83 186 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 ULBP2Q9BZM5 246 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 CRLF2Q9HC73 371 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 TBC1D23Q9NUY8 699 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 BAIAP2Q9UQB8 552 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 POFUT2Q9Y2G5 429 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 ICE1Q9Y2F5 2266 aa13.21□□□□□ -0.29
HSPG2-201ENST00000374673 CIB4A0PJX0 185 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 TUBAL3A6NHL2 446 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SAC3D1A6NKF1 404 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 XKRYO14609 159 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 AHCYL1O43865 530 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 RAD51DO75771 328 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 IGFBP1P08833 259 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-201ENST00000374673 PPP3CBP16298 524 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SH3BGRP55822 239 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-201ENST00000374673 PPP2R2BQ00005 443 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 TGFBR3Q03167 851 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 TSC22D1Q15714 1073 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 GABRA6Q16445 453 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SLC36A3Q495N2 470 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 CLEC12AQ5QGZ9 265 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 KDM4DQ6B0I6 523 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SP5Q6BEB4 398 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-201ENST00000374673 OR7E24Q6IFN5 339 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-201ENST00000374673 ADCK1Q86TW2 530 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 LNX2Q8N448 690 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 C17orf78Q8N4C9 275 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 TEX47Q8TBZ9 253 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 MCHR2Q969V1 340 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 RASD2Q96D21 266 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 NMD3Q96D46 503 aaKnown RBP13.2□□□□□ -0.3
HSPG2-201ENST00000374673 MUS81Q96NY9 551 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SNX18Q96RF0 628 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 TSSK6Q9BXA6 273 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 ACTR6Q9GZN1 396 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SMURF2Q9HAU4 748 aa13.2□□□□□ -0.3
HSPG2-201ENST00000374673 SLC24A3Q9HC58 644 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms