RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 HDXQ7Z353 690 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 PXKQ7Z7A4 578 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 ANKK1Q8NFD2 765 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 OR4F15Q8NGB8 312 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 LRR1Q96L50 414 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 EPYCQ99645 322 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 FOXB1Q99853 325 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 ULBP2Q9BZM5 246 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 C20orf141Q9NUB4 165 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 SELENONQ9NZV5 590 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 POFUT2Q9Y2G5 429 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 CORINQ9Y5Q5 1042 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 NOX1Q9Y5S8 564 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 ARHGAP32A7KAX9 2087 aa12.29□□□□□ -0.44
UBXN11-207ENST00000374223 IGKV1D-43A0A0B4J1Z2 117 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 WNT9BO14905 357 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 FMO6PO60774 539 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 LILRA1O75019 489 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 F13BP05160 661 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ASAH2BP0C7U1 165 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 DAOP14920 347 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 NR4A1P22736 598 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ARR3P36575 388 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 RBMXP38159 391 aaKnown RBP12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ALDH3B1P43353 468 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 CSNK1A1P48729 337 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ERVS71-1P61550 626 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 RAB1AP62820 205 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 GSG1Q2KHT4 349 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ALKBH6Q3KRA9 238 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 KRTAP24-1Q3LI83 254 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF627Q7L945 461 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 MOSPD2Q8NHP6 518 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 TMEM255BQ8WV15 326 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 STON2Q8WXE9 905 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF583Q96ND8 569 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF317Q96PQ6 595 aaPredicted RBP12.28□□□□□ -0.44
UBXN11-207ENST00000374223 TSPAN32Q96QS1 320 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF347Q96SE7 839 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 SYT3Q9BQG1 590 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 SHARPINQ9H0F6 387 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 RABEP2Q9H5N1 569 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
UBXN11-207ENST00000374223 TRAPPC13A5PLN9 417 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 ZNF726A6NNF4 738 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 LMX1BO60663 402 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 PDE5AO76074 875 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 CSF3P09919 207 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 PGA4P0DJD7 388 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 PGA3P0DJD8 388 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 APEHP13798 732 aaKnown RBP12.27□□□□□ -0.45
UBXN11-207ENST00000374223 COL8A2P25067 703 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 PPOXP50336 477 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 ZP4Q12836 540 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 KLF10Q13118 480 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 PIN1Q13526 163 aaPredicted RBP12.27□□□□□ -0.45
UBXN11-207ENST00000374223 TRMT5Q32P41 509 aaKnown RBP12.27□□□□□ -0.45
UBXN11-207ENST00000374223 TMEM255AQ5JRV8 349 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 TTC33Q6PID6 262 aaPredicted RBP12.27□□□□□ -0.45
UBXN11-207ENST00000374223 CCDC80Q76M96 950 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 BHLHE22Q8NFJ8 381 aaPredicted RBP12.27□□□□□ -0.45
UBXN11-207ENST00000374223 GTF3AQ92664 365 aaKnown RBP12.27□□□□□ -0.45
UBXN11-207ENST00000374223 LRRC58Q96CX6 371 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 SAR1AQ9NR31 198 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 FGFR1OP2Q9NVK5 253 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 GLTPQ9NZD2 209 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 SH3GLB1Q9Y371 365 aa12.27□□□□□ -0.45
UBXN11-207ENST00000374223 LOC100653049A0A140TA62 436 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 LOC390937A0A1W2PQ73 354 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 RNF13O43567 381 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
UBXN11-207ENST00000374223 KRT34O76011 436 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 NCR1O76036 304 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 CLPTM1O96005 669 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 HPXP02790 462 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 BMP4P12644 408 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 AQP2P41181 271 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 RPL18Q07020 188 aaKnown RBP12.26□□□□□ -0.45
UBXN11-207ENST00000374223 LAPTM4AQ15012 233 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 FXNQ16595 210 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 IQCCQ4KMZ1 466 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 ELFN2Q5R3F8 820 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 SWT1Q5T5J6 900 aaKnown RBP12.26□□□□□ -0.45
UBXN11-207ENST00000374223 C1QTNF12Q5T7M4 302 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 DEF8Q6ZN54 512 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 PATL1Q86TB9 770 aaKnown RBP12.26□□□□□ -0.45
UBXN11-207ENST00000374223 SNX32Q86XE0 403 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 POU5F2Q8N7G0 328 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 CLDN22Q8N7P3 220 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 SYT14Q8NB59 555 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 OR6X1Q8NH79 312 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 C10orf82Q8WW14 230 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 PCDHAC1Q9H158 963 aa12.26□□□□□ -0.45
UBXN11-207ENST00000374223 VIPAS39Q9H9C1 493 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms