RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TBPL2Q6SJ96 375 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 ZNF534Q76KX8 674 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 KDM8Q8N371 416 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 GOT1L1Q8NHS2 421 aaPredicted RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 KCNJ15Q99712 375 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 NIPSNAP3BQ9BS92 247 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 EGLN1Q9GZT9 426 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 SLC6A17Q9H1V8 727 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 PRAMEF25A6NGN4 478 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 ELAVL4P26378 380 aaKnown RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 SHC1P29353 583 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 LIPHQ8WWY8 451 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 TM4SF18Q96CE8 201 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 ZBED3Q96IU2 234 aaPredicted RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 SEC22AQ96IW7 307 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 NUDT9Q9BW91 350 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 EXOSC3Q9NQT5 275 aaKnown RBP10.65□□□□□ -0.7
VCL-202ENST00000372755 PCDHGA5Q9Y5G8 931 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 NUMBLQ9Y6R0 609 aa10.65□□□□□ -0.7
VCL-202ENST00000372755 APOA2P02652 100 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 TMEM31Q5JXX7 168 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 MARCH8Q5T0T0 291 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 CGB2Q6NT52 195 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 GDPD3Q7L5L3 318 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 CPEB3Q8NE35 698 aaKnown RBP10.65□□□□□ -0.71
VCL-202ENST00000372755 VN1R2Q8NFZ6 395 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 CD14P08571 375 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 GLB1P16278 677 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 MAP2K6P52564 334 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 EPHA5P54756 1037 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 RPS23P62266 143 aaKnown RBP10.65□□□□□ -0.71
VCL-202ENST00000372755 DEFA6Q01524 100 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.65□□□□□ -0.71
VCL-202ENST00000372755 TMEM52BQ4KMG9 183 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 Q6ZPB1 254 aaPredicted RBP10.65□□□□□ -0.71
VCL-202ENST00000372755 LINC00696Q6ZRV3 163 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 OVCH1Q7RTY7 1134 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 LINC00346Q8IVM7 164 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 LAX1Q8IWV1 398 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 SCCPDHQ8NBX0 429 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 SLC25A43Q8WUT9 341 aaPredicted RBP10.65□□□□□ -0.71
VCL-202ENST00000372755 CRYGNQ8WXF5 182 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 FAM3DQ96BQ1 224 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 FGGYQ96C11 551 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 SAT2Q96F10 170 aaPredicted RBP10.65□□□□□ -0.71
VCL-202ENST00000372755 EMC7Q9NPA0 242 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 SLAMF8Q9P0V8 285 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 IFT172Q9UG01 1749 aa10.65□□□□□ -0.71
VCL-202ENST00000372755 CLINT1Q14677 625 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 IAH1Q2TAA2 248 aaPredicted RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 SLC48A1Q6P1K1 146 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 KANSL1Q7Z3B3 1105 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 PXT1Q8NFP0 134 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 OR51A2Q8NGJ7 313 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 OR52N1Q8NH53 320 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 CORO2AQ92828 525 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 GINS3Q9BRX5 216 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 TPPP3Q9BW30 176 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 QRSL1Q9H0R6 528 aaKnown RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 FGF21Q9NSA1 209 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 PIGLQ9Y2B2 252 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 GPR55Q9Y2T6 319 aaPredicted RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 EIF4E2O60573 245 aaKnown RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 CSO75390 466 aaKnown RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 PMP2P02689 132 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 HOXD12P35452 270 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 RAB13P51153 203 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 BTN1A1Q13410 526 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 IL10RAQ13651 578 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 LILRB4Q8NHJ6 448 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 TIMD4Q96H15 378 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 SMIM14Q96QK8 99 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 HS3ST3A1Q9Y663 406 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 ALOX12BO75342 701 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 GLCEO94923 617 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 ADH4P08319 380 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 MEP1BQ16820 701 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 RTL8AQ9BWD3 113 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 CXorf36Q9H7Y0 433 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 PURGQ9UJV8 347 aaKnown RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 PADI1Q9ULC6 663 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 DEGS1O15121 323 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 DOK2O60496 412 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 GJB3O75712 270 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 TMEM11P17152 192 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 RFX2P48378 723 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 CYB561P49447 251 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 CRMP1Q14194 572 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 SLC51BQ86UW2 128 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 PRSS35Q8N3Z0 413 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 TMEM255BQ8WV15 326 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 APH1AQ96BI3 265 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 SLC25A21Q9BQT8 299 aaPredicted RBP10.64□□□□□ -0.71
VCL-202ENST00000372755 OR11A1Q9GZK7 315 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 ZCCHC4Q9H5U6 513 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 TEX51A0A1B0GUA7 166 aa10.64□□□□□ -0.71
VCL-202ENST00000372755 HSD17B6O14756 317 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms