RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 IGHEP01854 428 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZP3P21754 424 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 IVDP26440 423 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 CD27P26842 260 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 MAP2K6P52564 334 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 PLBD1Q6P4A8 553 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 PAQR9Q6ZVX9 377 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR51A7Q8NH64 312 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZNF256Q9Y2P7 627 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 BMP4P12644 408 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 IRF2P14316 349 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR10A3P58181 314 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 UBE2IP63279 158 aaKnown RBP13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR4D1Q15615 310 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 LPCAT3Q6P1A2 487 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 DYNC2LI1Q8TCX1 351 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLC35B4Q969S0 331 aa13.03□□□□□ -0.32
RAPGEF1-202ENST00000372190 A0A1B0GTQ1 180 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 A6NDN8 102 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 CD80P33681 288 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 PSMB2P49721 201 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 ZNF77Q15935 545 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 SHISA6Q6ZSJ9 500 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 OR2G3Q8NGZ4 309 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 GPA33Q99795 319 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 FAAP24Q9BTP7 215 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 SLC6A20Q9NP91 592 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 EHFQ9NZC4 300 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 LHX3Q9UBR4 397 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
RAPGEF1-202ENST00000372190 SGK494L7N484 410 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 NME4O00746 187 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 STAG3L3P0CL85 134 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 AADACP22760 399 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 AKR1C1Q04828 323 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 SHFQ7M4L6 423 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 RBMXL3Q8N7X1 1067 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 KCTD12Q96CX2 325 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 GALNT9Q9HCQ5 603 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 DOCK2Q92608 1830 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 TCRBP04435 133 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 GCAP28676 217 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 PPOXP50336 477 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 BTG1P62324 171 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 FBXO27Q8NI29 283 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 SLC7A6Q92536 515 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 FEVQ99581 238 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 IL17BQ9UHF5 180 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 DNAJC15Q9Y5T4 150 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 A0A1B0GUL6 1792 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF727A8MUV8 499 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 LGALS8O00214 317 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 SCAMP2O15127 329 aaKnown RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF28P17035 718 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 FAM74A1Q5RGS3 127 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 KIAA0907Q7Z7F0 614 aaPredicted RBP13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 EDEM2Q9BV94 578 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 HS3ST2Q9Y278 367 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 ZNF281Q9Y2X9 895 aa13.02□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR2F2O95006 317 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 AK1P00568 194 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 T-ENOLP0DO92 83 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR2F1Q13607 317 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 HES1Q14469 280 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 RPL7L1Q6DKI1 246 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 LCTLQ6UWM7 567 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 RANBP10Q6VN20 620 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 GABRG1Q8N1C3 465 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 LINC01465Q8N7H1 131 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 PITX2Q99697 317 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 ALOXE3Q9BYJ1 711 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 C2orf42Q9NWW7 574 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 A0A0A6YYC8 382 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 G3V2L1 256 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 I3L1I5 382 aaPredicted RBP13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 C1SP09871 688 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 ANXA7P20073 488 aaKnown RBP13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 CRHBPP24387 322 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 SGSHP51688 502 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 UBE2G1P62253 170 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 ACSM3Q53FZ2 586 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 GINS3Q9BRX5 216 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 FOXQ1Q9C009 403 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 MMP17Q9ULZ9 603 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 A0A087WUU8 490 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 CDC14CA4D256 554 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 VSTM2BA6NLU5 285 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 CPNE6O95741 557 aa13.01□□□□□ -0.33
RAPGEF1-202ENST00000372190 PMS2P2O95744 297 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms