RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RRAS2P62070 204 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 PLK5Q496M5 336 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 LYPD4Q6UWN0 246 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC46A3Q7Z3Q1 461 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF546Q86UE3 836 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF679Q8IYX0 411 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 GOT1L1Q8NHS2 421 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 KCNIP1Q9NZI2 227 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLAMF8Q9P0V8 285 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 CYB5R1Q9UHQ9 305 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 MUTYHQ9UIF7 546 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 MYO9BQ13459 2157 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF264O43296 627 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 FZD7O75084 574 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC43A1O75387 559 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ENTPD8Q5MY95 495 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 FFAR4Q5NUL3 377 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF836Q6ZNA1 936 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 LAX1Q8IWV1 398 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 EGLN2Q96KS0 407 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 CHRDQ9H2X0 955 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR52D1Q9H346 318 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 IL20Q9NYY1 176 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 WNT16Q9UBV4 365 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 MBD1Q9UIS9 605 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
RAPGEF1-201ENST00000372189 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR6V1Q8N148 313 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 RNF128Q8TEB7 428 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 TXNDC15Q96J42 360 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 LCORQ96JN0 433 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 INTS14Q96SY0 518 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 ALG12Q9BV10 488 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 METTL17Q9H7H0 456 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 COPS3Q9UNS2 423 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 CDK5RAP2Q96SN8 1893 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 SERPINA5P05154 406 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 HBA1P69905 142 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 PSPHP78330 225 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 KCNJ10P78508 379 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 HOXC5Q00444 222 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 OPCMLQ14982 345 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 DUSP7Q16829 419 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 C18orf63Q68DL7 685 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC46A1Q96NT5 459 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 ST6GALNAC5Q9BVH7 336 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 SMIM3Q9BZL3 60 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 NIPAL2Q9H841 368 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 LOC102725191A0A1B0GVB3 256 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 MEIS3P1A6NDR6 274 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 MRPL33O75394 65 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 NCR1O76036 304 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 THBS1P07996 1170 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 MMP7P09237 267 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 TRAPPC6BQ86SZ2 158 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR13G1Q8NGZ3 307 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 C14orf79Q96F83 325 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 PLEKHA3Q9HB20 300 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF320A2RRD8 509 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 A6NIN4 97 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 F5H5K5 113 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 PHOX2AO14813 284 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 CTNSO60931 367 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC35E2P0CK97 266 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 MTHFD2P13995 350 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 RAC2P15153 192 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 TSFMP43897 325 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 FXYD4P59646 89 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 CMTM1Q8IZ96 169 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 TOMM40LQ969M1 308 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 LYSMD1Q96S90 227 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 DDAH2O95865 285 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 SYPL1Q16563 259 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 OTUD1Q5VV17 481 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 SBSNQ6UWP8 590 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 NAA40Q86UY6 237 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 MEX3DQ86XN8 651 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 NGBQ9NPG2 151 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 MED17Q9NVC6 651 aa12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 TESQ9UGI8 421 aaKnown RBP12.29□□□□□ -0.44
RAPGEF1-201ENST00000372189 TARM1B6A8C7 271 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 SERPINA7P05543 415 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 OPRD1P41143 372 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 LTBQ06643 244 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 MUCL1Q96DR8 90 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 NPFFR2Q9Y5X5 522 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 ANKRD30BLA7E2S9 258 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 J3KTA2 159 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 B4GALT3O60512 393 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms