RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 SPTY2D1-AS1A0A0U1RR47 76 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 KBTBD11-OT1A0A1B0GTJ5 212 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 A0A1B0GW15 77 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PIPSLA2A3N6 862 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FBLL1A6NHQ2 334 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 NPIPB9F8W1W9 429 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SLC22A1O15245 554 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 RGS11O94810 467 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 SMIM18P0DKX4 95 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PPIAL4FP0DN26 164 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZNF35P13682 527 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ETS2P15036 469 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GLRA1P23415 457 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 AQP2P41181 271 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PGGT1BP53609 377 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FGF8P55075 233 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 CLDN2P57739 230 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 E2F1Q01094 437 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FOLH1Q04609 750 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 RBBP4Q09028 425 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 BIKQ13323 160 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PAGE3Q5JUK9 113 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FNDC7Q5VTL7 733 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 DHDDSQ86SQ9 333 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LGI4Q8N135 537 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GABRG1Q8N1C3 465 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 C12orf76Q8N812 135 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 BOLLQ8N9W6 283 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 ADIPOR1Q96A54 375 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 TMEM45BQ96B21 275 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 NEURL3Q96EH8 262 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 OTUB1Q96FW1 271 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZNF570Q96NI8 536 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 OR2V2Q96R30 315 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LMF2Q9BU23 707 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 METTL9Q9H1A3 318 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 C1orf198Q9H425 327 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 CLN8Q9UBY8 286 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PPIAL4AQ9Y536 164 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 HSPE1-MOB4S4R3N1 261 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 IGKV3D-11A0A0A0MRZ8 115 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 RNF223E7ERA6 249 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PSMD12O00232 456 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 TGFB1P01137 390 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 IRF1P10914 325 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 BCKDHAP12694 445 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GFAPP14136 432 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 DNASE1P24855 282 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 MPZP25189 248 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GPX4P36969 197 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 TAS2R50P59544 299 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FZD2Q14332 565 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 KIR2DS3Q14952 304 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 TRIP10Q15642 601 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 RFTN2Q52LD8 501 aaPredicted RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 HIST2H2BCQ6DN03 193 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 HIST2H2BDQ6DRA6 164 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FAM166AQ6J272 317 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 DHRS4L2Q6PKH6 230 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZNF562Q6V9R5 426 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LINC00299Q6ZSB3 139 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 CD163Q86VB7 1156 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 DEFB123Q8N688 67 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 AMER2Q8N7J2 671 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ZNF441Q8N8Z8 693 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 TRMT10AQ8TBZ6 339 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 PPP4R1Q8TF05 950 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 FCAMRQ8WWV6 532 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PYDC1Q8WXC3 89 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 PDXPQ96GD0 296 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 GFI1Q99684 422 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 NDUFAF3Q9BU61 184 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 G6PC3Q9BUM1 346 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 ACTRT3Q9BYD9 372 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 EBF3Q9H4W6 596 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 CARS2Q9HA77 564 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 WFDC1Q9HC57 220 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 RAB9BQ9NP90 201 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 LANCL2Q9NS86 450 aa3.49□□□□□ -1.85
MCF2-203ENST00000370576 NDRG4Q9ULP0 352 aaKnown RBP3.49□□□□□ -1.85
MCF2-203ENST00000370576 A0A0A6YYH2 397 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 A6NJ64 397 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 UBDO15205 165 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 RGS14O43566 566 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 SRPX2O60687 465 aaPredicted RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 EPPINO95925 133 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 HPP00738 406 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 HCKP08631 526 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 CD59P13987 128 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 ANXA7P20073 488 aaKnown RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 DTYMKP23919 212 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 THBS4P35443 961 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 RPL3P39023 403 aaKnown RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 ARPP19P56211 112 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 PRDX1Q06830 199 aaKnown RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 ACSM2AQ08AH3 577 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 ZNF239Q16600 458 aaKnown RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 SAMD4BQ5PRF9 694 aaKnown RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 DDI2Q5TDH0 399 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 FRG2Q64ET8 278 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms