RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-215ENST00000366742 SEC23BQ15437 767 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 HIST3H3Q16695 136 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 CYP2R1Q6VVX0 501 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 TUBA1AQ71U36 451 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 FAM169BQ8N8A8 192 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 PIGTQ969N2 578 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 ZNF566Q969W8 418 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 CCL19Q99731 98 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 IL1RAPQ9NPH3 570 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 ARID1AO14497 2285 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 USF3Q68DE3 2245 aa13.58□□□□□ -0.24
MRPL55-215ENST00000366742 TRAV27A0A087WT01 109 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 IGHV1-18A0A0C4DH31 117 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 TRMUO75648 421 aaKnown RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 IGLV1-44P01699 117 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 SAGP10523 405 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 ZNF26P17031 533 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 PAX7P23759 505 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 GPR4P46093 362 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 OMPP47874 163 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 LIMS1P48059 325 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 SLC9A3P48764 834 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 DAP3P51398 398 aaKnown RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 UBE2NP61088 152 aaKnown RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 TRIM25Q14258 630 aaKnown RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 PGGHGQ32M88 737 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 ANKDD1AQ495B1 522 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 ALG10Q5BKT4 473 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 FGD3Q5JSP0 725 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 LCN8Q6JVE9 175 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 PIWIL3Q7Z3Z3 882 aaKnown RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 OAFQ86UD1 273 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 OR13C2Q8NGS9 318 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 OR51A7Q8NH64 312 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
MRPL55-215ENST00000366742 RADILQ96JH8 1075 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 CLPTM1LQ96KA5 538 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 TXNIPQ9H3M7 391 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 MUC13Q9H3R2 512 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 POFUT2Q9Y2G5 429 aa13.57□□□□□ -0.24
MRPL55-215ENST00000366742 E7EQL1 145 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 IGKV3-15P01624 115 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 IGHG1P01857 330 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 IGHMP01871 453 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 FABP3P05413 133 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 SOD3P08294 240 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 ZNF133P52736 654 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 CDH11P55287 796 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 C3orf36Q3SXR2 165 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 MTX3Q5HYI7 312 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 B3GLCTQ6Y288 498 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 RRM2BQ7LG56 351 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 KRTAP1-3Q8IUG1 177 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 CCDC36Q8IYA8 594 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 OR4K5Q8NGD3 323 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 SMAP2Q8WU79 429 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 HDAC2Q92769 488 aaKnown RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 FBXW5Q969U6 566 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 MCUR1Q96AQ8 359 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 SLC7A6OSQ96CW6 309 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 FAM46AQ96IP4 442 aaKnown RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 SLC38A2Q96QD8 506 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 ZNF347Q96SE7 839 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 FOXB1Q99853 325 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 B3GNT2Q9NY97 397 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 CISD1Q9NZ45 108 aaKnown RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 ZNF224Q9NZL3 707 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 TMEM5Q9Y2B1 443 aa13.56□□□□□ -0.24
MRPL55-215ENST00000366742 TEP1Q99973 2627 aaKnown RBP13.56□□□□□ -0.24
MRPL55-215ENST00000366742 HEATR1Q9H583 2144 aaKnown RBP13.55□□□□□ -0.24
MRPL55-215ENST00000366742 SH3PXD2BA1X283 911 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 MCIDASD6RGH6 385 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 ACOT8O14734 319 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 DHHO43323 396 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 PTP4A3O75365 173 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 QDPRP09417 244 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 PAX1P15863 534 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 CBR1P16152 277 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 ACADSP16219 412 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 MAGEA2P43356 314 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 CLRN1P58418 232 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 SMIM11AP58511 58 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 CTXN1P60606 82 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 RPL27P61353 136 aaKnown RBP13.55□□□□□ -0.24
MRPL55-215ENST00000366742 SPIBQ01892 262 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 TAF11Q15544 211 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 SLC22A25Q6T423 547 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 ZNF813Q6ZN06 617 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 HDDC2Q7Z4H3 204 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 MYPOPQ86VE0 399 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-215ENST00000366742 IGFN1Q86VF2 1251 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 DHFR2Q86XF0 187 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 ZDHHC21Q8IVQ6 265 aa13.55□□□□□ -0.24
MRPL55-215ENST00000366742 CDK20Q8IZL9 346 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms