RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 C17orf105B2RV13 164 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 GCAP28676 217 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 TAS2R45P59539 299 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 TECTBQ96PL2 329 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 NTMT1Q9BV86 223 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 PEAK1Q9H792 1746 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 CRLF2Q9HC73 371 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 VAPAQ9P0L0 249 aa12.27□□□□□ -0.44
SRGAP3-201ENST00000360413 BET1O15155 118 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 ENSAO43768 121 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 BMP1P13497 986 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 GABRA4P48169 554 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 STEAP1BQ6NZ63 245 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 EID2Q8N6I1 236 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 CMTM3Q96MX0 182 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 UTP23Q9BRU9 249 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 RIMS4Q9H426 269 aaPredicted RBP12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 H7BYZ3 331 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 LGALS8O00214 317 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 PTAFRP25105 342 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 CD80P33681 288 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 PET117Q6UWS5 81 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 ANGPTL6Q8NI99 470 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 ARSGQ96EG1 525 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 GNB4Q9HAV0 340 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 UBQLN4Q9NRR5 601 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 SPTBN2O15020 2390 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 TERTO14746 1132 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 H2AFB1P0C5Y9 115 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 IDUAP35475 653 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 CLDN12P56749 244 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 BTG1P62324 171 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 TCEAL1Q15170 157 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 AANATQ16613 207 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 FIGLAQ6QHK4 219 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 FUBP1Q96AE4 644 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC2A9Q9NRM0 540 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 TRAPPC2LQ9UL33 140 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 CAMK2AQ9UQM7 478 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 ZDBF2Q9HCK1 2354 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 TMEM11P17152 192 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 RNF113BQ8IZP6 322 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 NRIP3Q9NQ35 241 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 MED17Q9NVC6 651 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 CEP250Q9BV73 2442 aa12.27□□□□□ -0.45
SRGAP3-201ENST00000360413 PMP2P02689 132 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 SHC2P98077 582 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 COMMD1Q8N668 190 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 IGSF5Q9NSI5 407 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 C5AR2Q9P296 337 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TRAV27A0A087WT01 109 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TCAPO15273 167 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ST8SIA5O15466 376 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 APEHP13798 732 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TACR1P25103 407 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TIGITQ495A1 244 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 PRICKLE2Q7Z3G6 844 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ISCA2Q86U28 154 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 LIPHQ8WWY8 451 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 OR14J1Q9UGF5 321 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 SPINT3P49223 89 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 MLF1P58340 268 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF566Q969W8 418 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 MAP6Q96JE9 813 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 SHARPINQ9H0F6 387 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 MARCH4Q9P2E8 410 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 POLEQ07864 2286 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 GPR171O14626 319 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 NQO2P16083 231 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 HMGCLP35914 325 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 LCN6P62502 163 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 KCNG3Q8TAE7 436 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TXLNGYQ9BZA5 131 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 A0A0A6YYJ9 748 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 GIPP09681 153 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 CTXN2P0C2S0 81 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ACRP10323 421 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 UBE2IP63279 158 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 RPL22L1Q6P5R6 122 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TMEM182Q6ZP80 229 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 LRRC56Q8IYG6 542 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF583Q96ND8 569 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ADAM29Q9UKF5 820 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF541Q9H0D2 1346 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 TMEM200CA6NKL6 621 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 KLRC4-KLRK1H3BQV0 150 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 K7ERQ8 282 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 FCGR2AP12318 317 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 FUT1P19526 365 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 BPIFB3P59826 476 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 CYS1Q717R9 158 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 BTNL2Q9UIR0 455 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 GDF1P27539 372 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 SRP9P49458 86 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 MANEAQ5SRI9 462 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms