RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 STEAP1BQ6NZ63 245 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 IL34Q6ZMJ4 242 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 USP53Q70EK8 1073 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 NDUFAF7Q7L592 441 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 INO80EQ8NBZ0 244 aaPredicted RBP13.6□□□□□ -0.23
UBAP1-202ENST00000359544 OR9A2Q8NGT5 310 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 OR2L2Q8NH16 312 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 OTUB2Q96DC9 234 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 SYNPO2LQ9H987 977 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 SEBOXQ9HB31 216 aaPredicted RBP13.6□□□□□ -0.23
UBAP1-202ENST00000359544 A0A1W2PR48 441 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 LRIT2A6NDA9 550 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 TMEM200CA6NKL6 621 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 HTR3BO95264 441 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 CD34P28906 385 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 PNLIPRP2P54317 469 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ACTBP60709 375 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ACTG1P63261 375 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF234Q14588 700 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 RNF212Q495C1 297 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 SLC48A1Q6P1K1 146 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ANKRD16Q6P6B7 361 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 MTSS1LQ765P7 747 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 TMPRSS12Q86WS5 348 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 MISPQ8IVT2 679 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ZSCAN1Q8NBB4 408 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 OR52E2Q8NGJ4 325 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 STOML3Q8TAV4 291 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 RNF141Q8WVD5 230 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF285Q96NJ3 590 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 LGR4Q9BXB1 951 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 OR52A5Q9H2C5 316 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 MIOXQ9UGB7 285 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 SERTAD3Q9UJW9 196 aa13.6□□□□□ -0.23
UBAP1-202ENST00000359544 CDV3Q9UKY7 258 aaKnown RBP13.6□□□□□ -0.23
UBAP1-202ENST00000359544 OBSL1O75147 1896 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 TBC1D3KA0A087X1G2 549 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 TBC1D3BA6NDS4 549 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 TBC1D3FA6NER0 549 aaPredicted RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 OR6C76A6NM76 312 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 PPM1DO15297 605 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 RNGTTO60942 597 aaKnown RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 LYPD3O95274 346 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 AIFM1O95831 613 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ANXA2P07355 339 aaKnown RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 CD79AP11912 226 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 F3P13726 295 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 RBM34P42696 430 aaKnown RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 PON3Q15166 354 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 INPP5JQ15735 1006 aaPredicted RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 Q499Y3 187 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 BEX5Q5H9J7 111 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 TBC1D3GQ6DHY5 549 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 RBMS3Q6XE24 437 aaKnown RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 MAMSTRQ6ZN01 415 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ABHD13Q7L211 337 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 PAQR8Q8TEZ7 354 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 CDS1Q92903 461 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ELSPBP1Q96BH3 223 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 UQCC1Q9NVA1 299 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 C2orf42Q9NWW7 574 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ATG4BQ9Y4P1 393 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 OTOL1A6NHN0 477 aaPredicted RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ZFPL1O95159 310 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 CD3DP04234 171 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 TPT1P13693 172 aaKnown RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 PSMB5P28074 263 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 PRSS3P35030 304 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 SSTP61278 116 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 EIF2S3LQ2VIR3 472 aaKnown RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ARHGAP11BQ3KRB8 267 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 PARGQ86W56 976 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 RGP1Q92546 391 aaPredicted RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 WNT2BQ93097 391 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 TMEM100Q9NV29 134 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 STEAP1Q9UHE8 339 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.59□□□□□ -0.23
UBAP1-202ENST00000359544 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF780BQ9Y6R6 833 aa13.59□□□□□ -0.23
UBAP1-202ENST00000359544 COLCA2A8K830 154 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 M0R296 226 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 SULT2B1O00204 365 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 HIST1H1TP22492 207 aaPredicted RBP13.58□□□□□ -0.23
UBAP1-202ENST00000359544 DDX6P26196 483 aaKnown RBP eCLIP13.58□□□□□ -0.23
UBAP1-202ENST00000359544 CLDN2P57739 230 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 TAS2R19P59542 299 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 SLC6A19Q695T7 634 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 MRM1Q6IN84 353 aaKnown RBP13.58□□□□□ -0.23
UBAP1-202ENST00000359544 CLEC1AQ8NC01 280 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 TFGQ92734 400 aaPredicted RBP13.58□□□□□ -0.23
UBAP1-202ENST00000359544 DTD2Q96FN9 168 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 TRPV4Q9HBA0 871 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 SMCO4Q9NRQ5 59 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 CES1P1Q9UKY3 287 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 GPR34Q9UPC5 381 aa13.58□□□□□ -0.23
UBAP1-202ENST00000359544 FGF19O95750 216 aa13.58□□□□□ -0.24
UBAP1-202ENST00000359544 F12P00748 615 aaPredicted RBP13.58□□□□□ -0.24
UBAP1-202ENST00000359544 IGHV2-70P01814 119 aa13.58□□□□□ -0.24
UBAP1-202ENST00000359544 SRFP11831 508 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms