RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SLC25A44Q96H78 314 aaPredicted RBP10.18□□□□□ -0.78
SSU72-202ENST00000359060 SLC19A3Q9BZV2 496 aa10.18□□□□□ -0.78
SSU72-202ENST00000359060 PPP1R3EQ9H7J1 279 aa10.18□□□□□ -0.78
SSU72-202ENST00000359060 COMMD9Q9P000 198 aa10.18□□□□□ -0.78
SSU72-202ENST00000359060 CHRNA9Q9UGM1 479 aa10.18□□□□□ -0.78
SSU72-202ENST00000359060 SUSD2Q9UGT4 822 aa10.18□□□□□ -0.78
SSU72-202ENST00000359060 ACOT7O00154 380 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 ARPC3O15145 178 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 AKR7A2O43488 359 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 TLX3O43711 291 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 SCRG1O75711 98 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 CRABP1P29762 137 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 VEGFCP49767 419 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 ZNF117Q03924 483 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 KLHL26Q53HC5 615 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 YOD1Q5VVQ6 348 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 CD200R1LQ6Q8B3 271 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 FTMTQ8N4E7 242 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 PLPP7Q8NBV4 271 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 NPEPL1Q8NDH3 523 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 EMC6Q9BV81 110 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 SLA2Q9H6Q3 261 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 IFITM5A6NNB3 132 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 TGFBR3LH3BV60 316 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 PIAS2O75928 621 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 SYPP08247 313 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 TRAPPC2P0DI81 140 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 TRAPPC2BP0DI82 140 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 HLA-DMAP28067 261 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 GNG2P59768 71 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 ACSM1Q08AH1 577 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.17□□□□□ -0.786e-6■□□□□ 8.6
SSU72-202ENST00000359060 COL28A1Q2UY09 1125 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 THOC7Q6I9Y2 204 aaKnown RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 ARIH2OSQ8N7S6 290 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 GPR119Q8TDV5 335 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 PCNPQ8WW12 178 aaKnown RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 C8orf44Q96CB5 159 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 PTGES2Q9H7Z7 377 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 SLC22A13Q9Y226 551 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 TP53BP1Q12888 1972 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 A0A0A6YYJ9 748 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 A8MVM7 634 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 L7N2F9 121 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 CREBL2O60519 120 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 WNT1P04628 370 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 RPS4Y1P22090 263 aaKnown RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 PRSS3P35030 304 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 OC90Q02509 493 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 FUT7Q11130 342 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 CCDC58Q4VC31 144 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 TSSK4Q6SA08 328 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 OVCH1Q7RTY7 1134 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 OR5L2Q8NGL0 311 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 MSANTD3Q96H12 275 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 OR5B2Q96R09 309 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 OR1F2PQ96R84 312 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 LAT2Q9GZY6 243 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 ZMAT3Q9HA38 289 aaKnown RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 NOX3Q9HBY0 568 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 IFT46Q9NQC8 304 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 C19orf25Q9UFG5 118 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 FLVCR2Q9UPI3 526 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 COA3Q9Y2R0 106 aaPredicted RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 MTCH2Q9Y6C9 303 aa10.17□□□□□ -0.78
SSU72-202ENST00000359060 ZNF106Q9H2Y7 1883 aaKnown RBP10.17□□□□□ -0.78
SSU72-202ENST00000359060 A0A1B0GVI7 797 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 C9J4A7 227 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 PSMB1P20618 241 aaKnown RBP10.16□□□□□ -0.78
SSU72-202ENST00000359060 SGCAQ16586 387 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 PRAMEF20Q5VT98 475 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 FAM46BQ96A09 425 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 CCDC74AQ96AQ1 378 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.16□□□□□ -0.785e-6■■□□□ 12.3
SSU72-202ENST00000359060 METTL17Q9H7H0 456 aaPredicted RBP10.16□□□□□ -0.78
SSU72-202ENST00000359060 KLK11Q9UBX7 282 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 EMC9Q9Y3B6 208 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 IGHV1OR21-1A0A087WYE8 117 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 TMEM269A0A1B0GVZ9 245 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 METTL21EPA6NDL7 271 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 TMEM212A6NML5 194 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 E9PQ18 207 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 EVI2BP34910 448 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 GAS1P54826 345 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 NKAIN1Q4KMZ8 207 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 PLCZ1Q86YW0 608 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 OR56B4Q8NH76 319 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 FRG2CA6NGY1 282 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 C17orf51A8MQB3 221 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 CYB5AP00167 134 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 ABCD3P28288 659 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 SMAD4Q13485 552 aaKnown RBP10.16□□□□□ -0.78
SSU72-202ENST00000359060 EFR3AQ14156 821 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 LPAL2Q16609 132 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 OR2G2Q8NGZ5 317 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 PTPMT1Q8WUK0 201 aaPredicted RBP10.16□□□□□ -0.78
SSU72-202ENST00000359060 THRSPQ92748 146 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 OR2M2Q96R28 347 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 VN1R1Q9GZP7 353 aa10.16□□□□□ -0.78
SSU72-202ENST00000359060 WWTR1Q9GZV5 400 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms