RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BPIFA2Q96DR5 249 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 C1QTNF6Q9BXI9 259 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 ADAM19Q9H013 955 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 PARD6AQ9NPB6 346 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 DCTN6O00399 190 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 RPA2P15927 270 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 TACR3P29371 465 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 FXYD4P59646 89 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 SYPL1Q16563 259 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 DBX2Q6ZNG2 339 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 CMTM1Q8IZ96 169 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 SDSLQ96GA7 329 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 GPR137Q96N19 417 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 PRODH2Q9UF12 536 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 CA14Q9ULX7 337 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 PRPS1P60891 318 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF90Q03938 601 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF836Q6ZNA1 936 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 LAS2Q8IYD9 372 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM130Q8N3G9 435 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 ZNF485Q8NCK3 441 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 OR51Q1Q8NH59 317 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 PHOSPHO1Q8TCT1 267 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 SLC38A5Q8WUX1 472 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 DUSP22Q9NRW4 184 aa5.63□□□□□ -1.51
VPS13B-203ENST00000358544 FAM221BA6H8Z2 402 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 H2AFB1P0C5Y9 115 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 DCTDP32321 178 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RAG2P55895 527 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PCBP4P57723 403 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ST3GAL2Q16842 350 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RPUSD3Q6P087 351 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM71Q6P5X7 295 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 Q6ZTK2 550 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 VRK3Q8IV63 474 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SCAMP4Q969E2 229 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM38AQ9H6F2 299 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ELOVL3Q9HB03 270 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SERINC1Q9NRX5 453 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 YY2O15391 372 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 LRP3O75074 770 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 NSA2O95478 260 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 GLYR1Q49A26 553 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PRSS45Q7RTY3 260 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RHOVQ96L33 236 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CASD1Q96PB1 797 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 NXF2Q9GZY0 626 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PLEKHA3Q9HB20 300 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TLR9Q9NR96 1032 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ACOT6Q3I5F7 207 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR4C11Q6IEV9 310 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 MVB12BQ9H7P6 319 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SERTAD4Q9NUC0 356 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CHST2Q9Y4C5 530 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CHD8Q9HCK8 2581 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PPP5D1E7EU14 171 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 GLULP15104 373 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 EXOSC6Q5RKV6 272 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FAAP20Q6NZ36 180 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CSNK1A1LQ8N752 337 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 DOK4Q8TEW6 326 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 POM121Q96HA1 1249 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 IL17FQ96PD4 163 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 VSX1Q9NZR4 365 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 A6NIZ1 184 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TOX4O94842 621 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FGF19O95750 216 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TM4SF1P30408 202 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RAP1BP61224 184 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SSX1Q16384 188 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 LINC00303Q3SY05 128 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CARD17Q5XLA6 110 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ARRDC2Q8TBH0 407 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR1E3Q8WZA6 343 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RBMXL1Q96E39 390 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 EGLN2Q96KS0 407 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PDCD1LG2Q9BQ51 273 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 IL26Q9NPH9 171 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 KCNG2Q9UJ96 466 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 RAB22AQ9UL26 194 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PPT2Q9UMR5 302 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PCDHGA9Q9Y5G4 932 aaKnown RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 DHPSP49366 369 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ADGRE4PQ86SQ3 457 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SOCS4Q8WXH5 440 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 CPNE4Q96A23 557 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 PDE7BQ9NP56 450 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 POLMQ9NP87 494 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 GPR173Q9NS66 373 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 C1orf226A1L170 272 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 TMEM218A2RU14 115 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 ZAR1LA6NP61 321 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FUT1P19526 365 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 GGNBP1Q5YKI7 109 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 FJX1Q86VR8 437 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SDR9C7Q8NEX9 313 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 OR52B4Q8NGK2 314 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 SLC39A9Q9NUM3 307 aa5.62□□□□□ -1.51
VPS13B-203ENST00000358544 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.62□□□□□ -1.51
VPS13B-203ENST00000358544 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms