RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 MGPP08493 103 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 HNRNPA1P09651 372 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHD3-202ENST00000358181 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 PXDC1Q5TGL8 231 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 TMEM19Q96HH6 336 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ZPBPQ9BS86 351 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 LIN7BQ9HAP6 207 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ZNF334Q9HCZ1 680 aaPredicted RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 NLKQ9UBE8 527 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 RGPD5Q99666 1765 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 METTL15A6NJ78 407 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 GSRP00390 522 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 HBG1P69891 147 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 HBG2P69892 147 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 GK3PQ14409 553 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 CXorf67Q86X51 503 aaPredicted RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 PTRH1Q86Y79 214 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 EXD3Q8N9H8 876 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 OR13C5Q8NGS8 318 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 OR13C2Q8NGS9 318 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 CMBLQ96DG6 245 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 MS4A4EQ96PG1 132 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 FOXC2Q99958 501 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SPHK1Q9NYA1 384 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 TREM2Q9NZC2 230 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 DHCR7Q9UBM7 475 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 MYH9P35579 1960 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 FAHP16930 419 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 COX7A1P24310 79 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 CYCSP99999 105 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 BAMBIQ13145 260 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 OR10J5Q8NHC4 309 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 LURAP1Q96LR2 239 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 SRPK3Q9UPE1 567 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 PIGAP37287 484 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 NOVA1P51513 510 aaKnown RBP9.05□□□□□ -0.96
CHD3-202ENST00000358181 H3F3AP84243 136 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 MPEG1Q2M385 716 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 TAS1R1Q7RTX1 841 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 ADGRG3Q86Y34 549 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 NAT6Q93015 286 aa9.05□□□□□ -0.96
CHD3-202ENST00000358181 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 GPR18Q14330 331 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 GPR148Q8TDV2 347 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 RPL3LQ92901 407 aaKnown RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 FUNDC2Q9BWH2 189 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 PRDM14Q9GZV8 571 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 PDE4DIPQ5VU43 2346 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ZNF593O00488 134 aaPredicted RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 GJB3O75712 270 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 NDUFB2O95178 105 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ACKR3P25106 362 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 AHRP35869 848 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 MFGE8Q08431 387 aaPredicted RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 PM20D2Q8IYS1 436 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 OR56B4Q8NH76 319 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SLC41A2Q96JW4 573 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 PSD2Q9BQI7 771 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 TAS2R8Q9NYW2 309 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 PHOX2AO14813 284 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SNAPINO95295 136 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SSTR2P30874 369 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 GPR17Q13304 367 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 GUCA2BQ16661 112 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 STUMQ69YW2 141 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 LRRC28Q86X40 367 aaPredicted RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 ANKLE1Q8NAG6 615 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ZNF519Q8TB69 540 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ZUFSPQ96AP4 578 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 LINC00052Q96N35 136 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 CHODLQ9H9P2 273 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 IL26Q9NPH9 171 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 MED17Q9NVC6 651 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SDK1Q7Z5N4 2213 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 CIDEAO60543 219 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 WNT7BP56706 349 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ERHP84090 104 aaKnown RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 NAAAQ02083 359 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ZDHHC14Q8IZN3 488 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 PQLC3Q8N755 202 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 HAPLN2Q9GZV7 340 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 MMP28Q9H239 520 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 MED9Q9NWA0 146 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 NFAT5O94916 1531 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 OR5K3A6NET4 321 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SLC25A6P12236 298 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 NAGAP17050 411 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SLC6A11P48066 632 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 CDC20BQ86Y33 519 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 TMEM239Q8WW34 195 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 KCNE4Q8WWG9 221 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 SEZ6LQ9BYH1 1024 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 QRSL1Q9H0R6 528 aaKnown RBP9.04□□□□□ -0.96
CHD3-202ENST00000358181 ANKRD19PQ9H560 264 aa9.04□□□□□ -0.96
CHD3-202ENST00000358181 ESRP2Q9H6T0 727 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms