RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ACTC1P68032 377 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ACTA1P68133 377 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SGCGQ13326 291 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 PEA15Q15121 130 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 IRF4Q15306 451 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZIC1Q15915 447 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMPRSS12Q86WS5 348 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC35F2Q8IXU6 374 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF619Q8N2I2 560 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR5T3Q8NGG3 340 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 WNT2BQ93097 391 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RSPRY1Q96DX4 576 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 LCORQ96JN0 433 aaPredicted RBP7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 RHOVQ96L33 236 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TSSK2Q96PF2 358 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 EDEM2Q9BV94 578 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 TCF7L1Q9HCS4 588 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 INPP5EQ9NRR6 644 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 PPP4R1LQ9P1A2 415 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 ST6GALNAC2Q9UJ37 374 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 PCDHGA5Q9Y5G8 931 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 F5P12259 2224 aa7.54□□□□□ -1.2
CDC42SE1-201ENST00000357235 CARNS1A5YM72 827 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 IFITM5A6NNB3 132 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 DBIP07108 87 aaKnown RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 GP1BAP07359 652 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 FBXO45P0C2W1 286 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 APEHP13798 732 aaKnown RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 NID1P14543 1247 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 CDK2P24941 298 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PEBP1P30086 187 aaKnown RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC6A6P31641 620 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 CSF2RBP32927 897 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PPT1P50897 306 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 DUSP8Q13202 625 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 SRSF5Q13243 272 aaKnown RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 DYRK1AQ13627 763 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 KCNAB1Q14722 419 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ARHGAP11BQ3KRB8 267 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADAMTSL4Q6UY14 1074 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRSS41Q7RTY9 318 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 CMIPQ8IY22 773 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF511Q8NB15 262 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZSCAN1Q8NBB4 408 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR10H5Q8NGA6 315 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNRF4Q8WWF5 429 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF764Q96H86 408 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PHPT1Q9NRX4 125 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF223Q9UK11 482 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 MDC1Q14676 2089 aaKnown RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 MYO9BQ13459 2157 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 NOTCH4Q99466 2003 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A1B0GWA3 101 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 UBE2QL1A1L167 161 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 C4orf47A7E2U8 309 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 MCIDASD6RGH6 385 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 BLOC1S5-TXNDC5H3BN57 136 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 TCAPO15273 167 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PRKNO60260 465 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 SC5DO75845 299 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 HEXAP06865 529 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 NGFRP08138 427 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 CPMP14384 443 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PCGF3Q3KNV8 242 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 STPG1Q5TH74 334 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 VITQ6UXI7 678 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR6K3Q8NGY3 331 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR2L8Q8NGY9 312 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR14C36Q8NHC7 312 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 WFIKKN2Q8TEU8 576 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 SMARCD2Q92925 531 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 RASD2Q96D21 266 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 GGACTQ9BVM4 153 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 GPN1Q9HCN4 374 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 STARD5Q9NSY2 213 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 RASL12Q9NYN1 266 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF629Q9UEG4 869 aaPredicted RBP7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 IKZF2Q9UKS7 526 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 PIAS3Q9Y6X2 628 aa7.53□□□□□ -1.2
CDC42SE1-201ENST00000357235 A0A1B0GUH1 482 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 PYCARD-AS1I3L0S3 204 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 GOSR2O14653 212 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2A4O95047 310 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZFPL1O95159 310 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR8G3PP0DMU2 310 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF35P13682 527 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 FOLR2P14207 255 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 IFNGR1P15260 489 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 CCR4P51679 360 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 POU4F2Q12837 409 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RUNX2Q13950 521 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 LRRC37A5PQ49AS3 106 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM69AQ5T7M9 428 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 MOB3CQ70IA8 216 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ANKRD33Q7Z3H0 272 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 VN1R4Q7Z5H5 301 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 SPRED2Q7Z698 418 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms