RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 LOC100289279A0A1B0GTE1 492 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 CRYM-AS1A6NIL9 109 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 YKT6O15498 198 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SELENOFO60613 162 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 ALDOCP09972 364 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 OR8B8Q15620 311 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 FRMPD2BQ6IN97 320 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 OR13D1Q8NGV5 346 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 APH1BQ8WW43 257 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SEMA4CQ9C0C4 833 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 PPP6CO00743 305 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 UGDHO60701 494 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 HLA-FP30511 346 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 AKR1C3P42330 323 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 HNRNPA3P51991 378 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 CLDN10P78369 228 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 CDC20Q12834 499 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 LCTLQ6UWM7 567 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SLC46A3Q7Z3Q1 461 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 CHD4Q14839 1912 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 CCDC88AQ3V6T2 1871 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 B4GALT3O60512 393 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 H2AFB1P0C5Y9 115 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 ETV6P41212 452 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 FYTTD1Q96QD9 318 aaKnown RBP10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 NMNAT3Q96T66 252 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 ABHD6Q9BV23 337 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 SLC2A11Q9BYW1 496 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 CLEC2DQ9UHP7 191 aa10.22□□□□□ -0.77
GTF3C1-201ENST00000356183 HS3ST1O14792 307 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 PRAMEF4O60810 478 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 SRMP19623 302 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 PSMB5P28074 263 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 SIRPAP78324 504 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 CDK5Q00535 292 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 LPAR4Q99677 370 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 SOX7Q9BT81 388 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 OR51I2Q9H344 312 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 GNG12Q9UBI6 72 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 GJB3O75712 270 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 CD276Q5ZPR3 534 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 WDR5BQ86VZ2 330 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 THNSL2Q86YJ6 484 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 KLHDC8BQ8IXV7 354 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 LRRC56Q8IYG6 542 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 TCTN2Q96GX1 697 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 DCLRE1CQ96SD1 692 aaKnown RBP10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 ULBP2Q9BZM5 246 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 NMES1Q9C002 83 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 DYNLRB1Q9NP97 96 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 ACSS1Q9NUB1 689 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 LRIT1Q9P2V4 623 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 NUMA1Q14980 2115 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 OR52A4PA6NMU1 304 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 HEPACAM2A8MVW5 462 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 PAPLNO95428 1278 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 OLFM2O95897 454 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 COTL1Q14019 142 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 AKR7LQ8NHP1 331 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 KCNJ15Q99712 375 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 PBX4Q9BYU1 374 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 AMBRA1Q9C0C7 1298 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 ZNF586Q9NXT0 402 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 RBPJLQ9UBG7 517 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 ZNF629Q9UEG4 869 aaPredicted RBP10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 SLCO3A1Q9UIG8 710 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 PPP1R3CQ9UQK1 317 aa10.21□□□□□ -0.77
GTF3C1-201ENST00000356183 A0A0J9YY10 115 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 MLF2Q15773 248 aaPredicted RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 RPUSD3Q6P087 351 aaKnown RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 CD300LGQ6UXG3 332 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 CLEC1AQ8NC01 280 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 LYSMD1Q96S90 227 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 ALG12Q9BV10 488 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 TRABD2BA6NFA1 517 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 NPIPB15A6NHN6 443 aaPredicted RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 RAD52P43351 418 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 SOWAHCQ53LP3 525 aaPredicted RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 PM20D1Q6GTS8 502 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 DLK2Q6UY11 383 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 SLC16A14Q7RTX9 510 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 AMIGO3Q86WK7 504 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 SCCPDHQ8NBX0 429 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 PIGTQ969N2 578 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 HRASLS5Q96KN8 279 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 ADAM29Q9UKF5 820 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 ETV7Q9Y603 341 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 TOX4O94842 621 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 UBL3O95164 117 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 HBA1P69905 142 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 ALKBH1Q13686 389 aaKnown RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 EXOSC2Q13868 293 aaKnown RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 AMDHD1Q96NU7 426 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 NEURL2Q9BR09 285 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 HEYLQ9NQ87 328 aaPredicted RBP10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 GABRQQ9UN88 632 aa10.21□□□□□ -0.78
GTF3C1-201ENST00000356183 MPGP29372 298 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms