RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 KRT33AO76009 404 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 TPPPO94811 219 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 PNLIPRP2P54317 469 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 SCAND1P57086 179 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 CFHR1Q03591 330 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 SMAD4Q13485 552 aaKnown RBP20.02■□□□□ 0.8
UPF3A-201ENST00000351487 NSDHLQ15738 373 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 VWA2Q5GFL6 755 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 STPG1Q5TH74 334 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 C1QL3Q5VWW1 255 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF782Q6ZMW2 699 aaPredicted RBP20.02■□□□□ 0.8
UPF3A-201ENST00000351487 PLXDC1Q8IUK5 500 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 PM20D2Q8IYS1 436 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF441Q8N8Z8 693 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 OR1N1Q8NGS0 311 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 OTOSQ8NHW6 89 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 HGDQ93099 445 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 PHF7Q9BWX1 381 aaPredicted RBP20.02■□□□□ 0.8
UPF3A-201ENST00000351487 COMMD4Q9H0A8 199 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 HRASLSQ9HDD0 168 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 COPS7AQ9UBW8 275 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 ZNF222Q9UK12 451 aa20.02■□□□□ 0.8
UPF3A-201ENST00000351487 C17orf51A8MQB3 221 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 NPIPB7O75200 414 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 SOX2P48431 317 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 RASGEF1BQ0VAM2 473 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 ST3GAL2Q16842 350 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 ELFN2Q5R3F8 820 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 DND1Q8IYX4 353 aaKnown RBP20.02■□□□□ 0.79
UPF3A-201ENST00000351487 ZNF417Q8TAU3 575 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 NSMAFQ92636 917 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 FKBP7Q9Y680 259 aa20.02■□□□□ 0.79
UPF3A-201ENST00000351487 PCNX3Q9H6A9 2034 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 ADAMTS20P59510 1910 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 OR6C76A6NM76 312 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 NUDT21O43809 227 aaKnown RBP20.01■□□□□ 0.79
UPF3A-201ENST00000351487 GMFGO60234 142 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 PEX14O75381 377 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 SLC25A12O75746 678 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 SULT1A3P0DMM9 295 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 SULT1A4P0DMN0 295 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 GP1BBP13224 206 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 CXCL3P19876 107 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 ABCD3P28288 659 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 CBFBQ13951 182 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 TMEM69Q5SWH9 247 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 FDX2Q6P4F2 183 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 SLC29A4Q7RTT9 530 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 GPR148Q8TDV2 347 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 C15orf40Q8WUR7 153 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 GCDHQ92947 438 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-201ENST00000351487 CA14Q9ULX7 337 aa20.01■□□□□ 0.79
UPF3A-201ENST00000351487 A0A1B0GTH9 108 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 XKRYO14609 159 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 DUX1O43812 170 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 LDOC1O95751 146 aaPredicted RBP20■□□□□ 0.79
UPF3A-201ENST00000351487 CFPP27918 469 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 ART1P52961 327 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 SERPINA12Q8IW75 414 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 OR11G2Q8NGC1 345 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 ZNF519Q8TB69 540 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 THEM6Q8WUY1 208 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 FCAMRQ8WWV6 532 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 METTL21AQ8WXB1 218 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 SNAPC3Q92966 411 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 SLC41A2Q96JW4 573 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 C4orf45Q96LM5 186 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 ARPC4-TTLL3A0A0A6YYG9 625 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 A0A1B0GVI7 797 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 GPR171O14626 319 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 GMDSO60547 372 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 NUDT14O95848 222 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 FOLR1P15328 257 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 HTR2BP41595 481 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 RPS27P42677 84 aaKnown RBP20■□□□□ 0.79
UPF3A-201ENST00000351487 POLR2HP52434 150 aaKnown RBP20■□□□□ 0.79
UPF3A-201ENST00000351487 OLFML2AQ68BL7 652 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 POMZP3Q6PJE2 187 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 PRSS35Q8N3Z0 413 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 ZNF676Q8N7Q3 588 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 THRSPQ92748 146 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 DCBLD2Q96PD2 775 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 VN1R1Q9GZP7 353 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 KCNG2Q9UJ96 466 aa20■□□□□ 0.79
UPF3A-201ENST00000351487 ASXL3Q9C0F0 2248 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 TRAV8-7A0A075B6U6 113 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 MEIKINA0A087WXM9 373 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 A0A1B0GX78 115 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 PRSS37A4D1T9 235 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 ERVH48-1M5A8F1 160 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 KHNYNO15037 678 aaKnown RBP19.99■□□□□ 0.79
UPF3A-201ENST00000351487 PRAF2O60831 178 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 CSF2RBP32927 897 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 P2RX1P51575 399 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 GNG2P59768 71 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 RPL27P61353 136 aaKnown RBP19.99■□□□□ 0.79
UPF3A-201ENST00000351487 ARHGAP40Q5TG30 622 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 CHRDL2Q6WN34 429 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 CEP76Q8TAP6 659 aa19.99■□□□□ 0.79
UPF3A-201ENST00000351487 MCHR2Q969V1 340 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms