RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SRPK3Q9UPE1 567 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 SATB2Q9UPW6 733 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 CD14P08571 375 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 PNMTP11086 282 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 PRPS1P60891 318 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 ETFDHQ16134 617 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 SGCBQ16585 318 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 C9orf135Q5VTT2 229 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 GPALPP1Q8IXQ4 340 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 FAM181AQ8N9Y4 354 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 CADM4Q8NFZ8 388 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 TMEM234Q8WY98 164 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 PPP1R14AQ96A00 147 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 RTN4RQ9BZR6 473 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 ANKRD19PQ9H560 264 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 KLHL13Q9P2N7 655 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 PCNX2A6NKB5 2137 aa9.44□□□□□ -0.9
SMPD4-201ENST00000351288 AKAP6Q13023 2319 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 A0A1W2PR77 199 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ORC5O43913 435 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 PTP4A3O75365 173 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 CELA2AP08217 269 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 SPI1P17947 270 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 S1PR1P21453 382 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 NANOS3P60323 173 aaKnown RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 RPS15P62841 145 aaKnown RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 FAPQ12884 760 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 CEP78Q5JTW2 689 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 TMPRSS11FQ6ZWK6 438 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 TOMM5Q8N4H5 51 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 SLC38A9Q8NBW4 561 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 FAM46BQ96A09 425 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 DUSP23Q9BVJ7 150 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 SERINC1Q9NRX5 453 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 MED17Q9NVC6 651 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 MRPL39Q9NYK5 338 aaKnown RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 R4GN57 208 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ZNF593O00488 134 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 OR7A10O76100 309 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 TCN2P20062 427 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 MNDAP41218 407 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 CDKN2AP42771 156 aaKnown RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 SIRPAP78324 504 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 PLA2G7Q13093 441 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 FHL1Q13642 323 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 LIPNQ5VXI9 398 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 KLHL24Q6TFL4 600 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 OR10AC1Q8NH08 325 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 PRRG4Q9BZD6 226 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 WWTR1Q9GZV5 400 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 WDR76Q9H967 626 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ELOVL3Q9HB03 270 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 KLK11Q9UBX7 282 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 POLHQ9Y253 713 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 KLHDC2Q9Y2U9 406 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 PIEZO2Q9H5I5 2752 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 CACNA1DQ01668 2161 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 IGHV3-15A0A0B4J1V0 119 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 A0A0G2JK05 382 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 TMIGD3P0DMS9 266 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 SLC37A1P57057 533 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ACTC1P68032 377 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ACTA1P68133 377 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 RNF4P78317 190 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 CBFBQ13951 182 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 FGFBP1Q14512 234 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ACKR1Q16570 336 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 ARSKQ6UWY0 536 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 FCRLAQ7L513 359 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 AGBL5Q8NDL9 886 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 OR51A4Q8NGJ6 313 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 OR5AK2Q8NH90 309 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 OR14A16Q8NHC5 309 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 TAAR8Q969N4 342 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 RBP7Q96R05 134 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 LMF2Q9BU23 707 aaKnown RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 PTGES2Q9H7Z7 377 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 COQ3Q9NZJ6 369 aa9.43□□□□□ -0.9
SMPD4-201ENST00000351288 C19orf25Q9UFG5 118 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-201ENST00000351288 FAM172BPA6NC97 362 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 H0YC42 278 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 RRAS2P62070 204 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 FMODQ06828 376 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CHAF1BQ13112 559 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 EIF2B1Q14232 305 aaKnown RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 SF3A2Q15428 464 aaKnown RBP9.42□□□□□ -0.9
SMPD4-201ENST00000351288 TMEM255AQ5JRV8 349 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ZNF440Q8IYI8 595 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 OR8H1Q8NGG4 311 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 MSANTD3Q96H12 275 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 ARL5BQ96KC2 179 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 SNX18Q96RF0 628 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 MED28Q9H204 178 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CYSLTR2Q9NS75 346 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 KCNG2Q9UJ96 466 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 DKKL1Q9UK85 242 aa9.42□□□□□ -0.9
SMPD4-201ENST00000351288 CACNG2Q9Y698 323 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms