RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ZNF749O43361 778 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 FBXO24O75426 580 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 OR2C1O95371 312 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 IGLV3-25P01717 112 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 MT-ND5P03915 603 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 DPP4P27487 766 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 AOAHP28039 575 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 TLX1P31314 330 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 GPR3P46089 330 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 RPS23P62266 143 aaKnown RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 PPP2CBP62714 309 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 PPP2CAP67775 309 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 SGCGQ13326 291 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 ARSJQ5FYB0 599 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 FAM151BQ6UXP7 276 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 MRGPREQ86SM8 312 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 PNLDC1Q8NA58 520 aaKnown RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 OR5K2Q8NHB8 316 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 HCAR1Q9BXC0 346 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 CYTL1Q9NRR1 136 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 A0A087WUU8 490 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 TRAV1-2A0A0B4J238 106 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 A0A1B0GTI1 187 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 F8VVB4 439 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 F8VWA3 439 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 TCF21O43680 179 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 PQBP1O60828 265 aaKnown RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 LRP3O75074 770 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 DIRAS3O95661 229 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 CHRM4P08173 479 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 GTF2F2P13984 249 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 RAB6AP20340 208 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 TOMM34Q15785 309 aaPredicted RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 DNLZQ5SXM8 178 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 PRAMEF17Q5VTA0 474 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 FAM46CQ5VWP2 391 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF343Q6P1L6 599 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 FAM219AQ8IW50 185 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 MMP21Q8N119 569 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 ZBTB2Q8N680 514 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 EID2Q8N6I1 236 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 OR4K14Q8NGD5 310 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 OR6T1Q8NGN1 323 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 CD300LFQ8TDQ1 290 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 NEK7Q8TDX7 302 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 GALNT14Q96FL9 552 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 MRGPRX3Q96LB0 322 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 ACTRT3Q9BYD9 372 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 AMDHD2Q9Y303 409 aa9.73□□□□□ -0.85
CAPN3-203ENST00000349748 TDRD15B5MCY1 1934 aaKnown RBP9.73□□□□□ -0.85
CAPN3-203ENST00000349748 THSD7BQ9C0I4 1608 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 SMCO3A2RU48 225 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 CDHR4A6H8M9 788 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 EEF1E1-BLOC1S5C9J1V9 151 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 SAP18O00422 153 aaKnown RBP9.72□□□□□ -0.85
CAPN3-203ENST00000349748 XRCC3O43542 346 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 OR1F1O43749 312 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 CD3DP04234 171 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 GZMBP10144 247 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 CD34P28906 385 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 NTSP30990 170 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 FAUP35544 74 aaKnown RBP9.72□□□□□ -0.85
CAPN3-203ENST00000349748 DVL1P1P54792 670 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-203ENST00000349748 SMIM11AP58511 58 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 NKX6-1P78426 367 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-203ENST00000349748 EIF4EBP2Q13542 120 aaPredicted RBP9.72□□□□□ -0.85
CAPN3-203ENST00000349748 GGTA1PQ4G0N0 100 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 C14orf28Q4W4Y0 310 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 IER5LQ5T953 404 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 TMEM220Q6QAJ8 160 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 LCTLQ6UWM7 567 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 ADCK2Q7Z695 626 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 OR4K17Q8NGC6 315 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 OR5R1Q8NH85 324 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 DCUN1D4Q92564 292 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 RRNAD1Q96FB5 475 aaKnown RBP9.72□□□□□ -0.85
CAPN3-203ENST00000349748 G6PC3Q9BUM1 346 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 OR52A5Q9H2C5 316 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 UBQLN4Q9NRR5 601 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 GAB2Q9UQC2 676 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 SCML2Q9UQR0 700 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 HDGFL3Q9Y3E1 203 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 URGCP-MRPS24S4R325 110 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 A0A1W2PPC1 479 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 TBC1D3BA6NDS4 549 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 ACOD1A6NK06 481 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 ZNF724A8MTY0 619 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 RPL36A-HNRNPH2H7BZ11 118 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 M0R143 59 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 HSPA12AO43301 675 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 GPR37L1O60883 481 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 PCCBP05166 539 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 TBC1D3HP0C7X1 549 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 FGF7P21781 194 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 ITPKBP27987 946 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 GPR4P46093 362 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 CARD18P57730 90 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 RASGEF1BQ0VAM2 473 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 DHRS2Q13268 280 aa9.72□□□□□ -0.85
CAPN3-203ENST00000349748 GGNBP1Q5YKI7 109 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms