RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 KIR2DS5Q14953 304 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF750Q32MQ0 723 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 PCGF3Q3KNV8 242 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 Q499Y3 187 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 TMEM31Q5JXX7 168 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 C18orf63Q68DL7 685 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF425Q6IV72 752 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 RD3Q7Z3Z2 195 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF546Q86UE3 836 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 SPAG16Q8N0X2 631 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 SPEM1Q8N4L4 309 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 SLC16A11Q8NCK7 471 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 OR52B4Q8NGK2 314 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 CLDN23Q96B33 292 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 XKR8Q9H6D3 395 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 TMEM138Q9NPI0 162 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 COA4Q9NYJ1 87 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 CHRNA9Q9UGM1 479 aa14.47□□□□□ -0.09
HMGA1-202ENST00000347617 MRTO4Q9UKD2 239 aaKnown RBP14.47□□□□□ -0.09
HMGA1-202ENST00000347617 DISC1C4P0D8 188 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 SULT1C2O00338 296 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 NDUFB2O95178 105 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 CLUP10909 449 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 MST1P26927 711 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 SORDQ00796 357 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 EXOSC6Q5RKV6 272 aaKnown RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 MRPL2Q5T653 305 aaKnown RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 GLT8D1Q68CQ7 371 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 DHRS7BQ6IAN0 325 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 HAGHLQ6PII5 290 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 STAC2Q6ZMT1 411 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 SLC22A18ASQ8N1D0 253 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 C12orf45Q8N5I9 185 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 CYB561A3Q8NBI2 242 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 MFSD9Q8NBP5 474 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 ZMYND19Q96E35 227 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 KLHDC7BQ96G42 594 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 NARS2Q96I59 477 aaKnown RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 STACQ99469 402 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 TSNAXQ99598 290 aaKnown RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 SLC25A21Q9BQT8 299 aaPredicted RBP14.46□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF304Q9HCX3 659 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 DUSP22Q9NRW4 184 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 ENTPD2Q9Y5L3 495 aa14.46□□□□□ -0.09
HMGA1-202ENST00000347617 LRP4O75096 1905 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 METTL12A8MUP2 240 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 H0YC42 278 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 PPM1DO15297 605 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 TNFSF14O43557 240 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 RDH16O75452 317 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 EML2O95834 649 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 IGF2P01344 180 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 THEGLP0DJG4 465 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 FUT1P19526 365 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 CD27P26842 260 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 RFC3P40938 356 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ACTBP60709 375 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ERVK-25P63136 954 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ACTG1P63261 375 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 LTBQ06643 244 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 FZD2Q14332 565 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ANKRD16Q6P6B7 361 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 SERPINA12Q8IW75 414 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 UBALD2Q8IYN6 164 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 OR7G2Q8NG99 324 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF417Q8TAU3 575 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 GCDHQ92947 438 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 NRTNQ99748 197 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 PDCD1LG2Q9BQ51 273 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 IER2Q9BTL4 223 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF426Q9BUY5 554 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 TRIM2Q9C040 744 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 SEMA4CQ9C0C4 833 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 SLC25A18Q9H1K4 315 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 SRMSQ9H3Y6 488 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ZNF107Q9UII5 783 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 TRAV27A0A087WT01 109 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 TMEM200CA6NKL6 621 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 HSPB2A8KAH6 182 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ITGB2P05107 769 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 GUSBP08236 651 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 PVALBP20472 110 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 SDHBP21912 280 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 CERS1P27544 350 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 ITPKBP27987 946 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 PEBP1P30086 187 aaKnown RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 PTGER1P34995 402 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 AKR1D1P51857 326 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 HSPB2Q16082 182 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 DUSP5Q16690 384 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 PAN3Q58A45 887 aaKnown RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 FAM220AQ7Z4H9 259 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 OR52E2Q8NGJ4 325 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 OR51A7Q8NH64 312 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 CCL4L1Q8NHW4 92 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 GAL3ST3Q96A11 431 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 WDR89Q96FK6 387 aaPredicted RBP14.45□□□□□ -0.1
HMGA1-202ENST00000347617 GUCD1Q96NT3 240 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 POTEKPQ9BYX7 375 aa14.45□□□□□ -0.1
HMGA1-202ENST00000347617 EXO5Q9H790 373 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms