RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 GABRPO00591 440 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 XKRYO14609 159 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 CDRT1O95170 752 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 RENP00797 406 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 MT-ND5P03915 603 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 ADH6P28332 368 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 SDC2P34741 201 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 OR2B6P58173 313 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 B3GALT5-AS1P59052 145 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 HSF1Q00613 529 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 ZNF404Q494X3 552 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 CDONQ4KMG0 1287 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 ZNF684Q5T5D7 378 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 LCN1P1Q5VSP4 162 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 DPY19L4Q7Z388 723 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 SCAIQ8N9R8 606 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 OR2T4Q8NH00 348 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 HSD17B8Q92506 261 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 ZBTB8AQ96BR9 441 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 TMEM41AQ96HV5 264 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 PGLYRP3Q96LB9 341 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 KCNS3Q9BQ31 491 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 AKIP1Q9NQ31 210 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 MRPL22Q9NWU5 206 aaKnown RBP12.16□□□□□ -0.46
CDC42-202ENST00000344548 LRFN1Q9P244 771 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 NOX1Q9Y5S8 564 aa12.16□□□□□ -0.46
CDC42-202ENST00000344548 FRYQ5TBA9 3013 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 SPENQ96T58 3664 aaKnown RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 CTDSP2O14595 271 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 SLC30A4O14863 429 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 CBR3O75828 277 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 SNX4O95219 450 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 P04436 131 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 GTF2E2P29084 291 aaKnown RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 ACTC1P68032 377 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 ACTA1P68133 377 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 FOXO1Q12778 655 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 SELENBP1Q13228 472 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 TOMM20Q15388 145 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 GDPGP1Q6ZNW5 385 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 RAB43Q86YS6 212 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 DND1Q8IYX4 353 aaKnown RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 MFSD4AQ8N468 514 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 C6orf62Q9GZU0 229 aaPredicted RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 NXF2Q9GZY0 626 aaKnown RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 SACM1LQ9NTJ5 587 aa12.15□□□□□ -0.46
CDC42-202ENST00000344548 VSX1Q9NZR4 365 aaPredicted RBP12.15□□□□□ -0.46
CDC42-202ENST00000344548 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 A0A1B0GTH9 108 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 A0A1W2PRG6 482 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 FZD7O75084 574 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 WDPCPO95876 746 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 WNT11O96014 354 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 EIF1P41567 113 aaKnown RBP12.14□□□□□ -0.47
CDC42-202ENST00000344548 MAP2K6P52564 334 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 NANOS3P60323 173 aaKnown RBP12.14□□□□□ -0.47
CDC42-202ENST00000344548 TUBA3EQ6PEY2 450 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 LRRC69Q6ZNQ3 347 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 GPAT4Q86UL3 456 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 OR6N2Q8NGY6 317 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 SNX33Q8WV41 574 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 THAP4Q8WY91 577 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 TRIM36Q9NQ86 728 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 DLL3Q9NYJ7 618 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 GNG8Q9UK08 70 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 DKKL1Q9UK85 242 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 MOKQ9UQ07 419 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 B3GALT5Q9Y2C3 310 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 TRDV1A0A1B0GX56 115 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 A6NL46 340 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 NKX2-8O15522 239 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 PLPP2O43688 288 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 CENPAP49450 140 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 BIDP55957 195 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 CLDN20P56880 219 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 BDH1Q02338 343 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 DCTN2Q13561 401 aaKnown RBP12.14□□□□□ -0.47
CDC42-202ENST00000344548 DMKNQ6E0U4 476 aaPredicted RBP12.14□□□□□ -0.47
CDC42-202ENST00000344548 SLC16A9Q7RTY1 509 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 PXKQ7Z7A4 578 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 CDC20BQ86Y33 519 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 MIB2Q96AX9 1013 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 UCN2Q96RP3 112 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 GALNT8Q9NY28 637 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
CDC42-202ENST00000344548 KCNG2Q9UJ96 466 aa12.14□□□□□ -0.47
CDC42-202ENST00000344548 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
CDC42-202ENST00000344548 A0A0J9YW62 118 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 FAM47E-STBD1D6RA91 191 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 SULT2B1O00204 365 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 NCR1O76036 304 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 OR8G3PP0DMU2 310 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 RBMS1P29558 406 aaKnown RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 FGF9P31371 208 aaPredicted RBP12.13□□□□□ -0.47
CDC42-202ENST00000344548 MAGEB1P43366 347 aa12.13□□□□□ -0.47
CDC42-202ENST00000344548 STARP49675 285 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms