RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TVP23BQ9NYZ1 205 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CNIH4Q9P003 139 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RNASEK-C17orf49H0YIS7 233 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 HYAL3O43820 417 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RHBDL1O75783 438 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ETHE1O95571 254 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FCARP24071 287 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SNU13P55769 128 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SMAD3P84022 425 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FAM86B1Q8N7N1 296 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC26A10Q8NG04 563 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 AUNIPQ9H7T9 357 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SPATA31A3Q5VYP0 1347 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 BCAT2O15382 392 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LAMP1P11279 417 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GABRA1P14867 456 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 COMPP49747 757 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 NOVA1P51513 510 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CRHR2Q13324 411 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SSX8Q7RTT4 187 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LENG9Q96B70 501 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TVP23CQ96ET8 276 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TXNDC17Q9BRA2 123 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RHBGQ9H310 441 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ATXN7L1Q9ULK2 861 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ARL2-SNX15V9GYD0 113 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TRIP11Q15643 1979 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MYO5CQ9NQX4 1742 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF878C9JN71 531 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GAPDHP04406 335 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TCRBP04435 133 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM225BP0DP42 221 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GLRA1P23415 457 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MSMO1Q15800 293 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ADPRMQ3LIE5 342 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ACSM3Q53FZ2 586 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZPBP2Q6X784 338 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC16A13Q7RTY0 426 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PLPPR4Q7Z2D5 763 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 DNERQ8NFT8 737 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RPUSD4Q96CM3 377 aaKnown RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 DBNDD2Q9BQY9 259 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF780BQ9Y6R6 833 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 IQGAP1P46940 1657 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ESR1P03372 595 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CCR2P41597 374 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SERTAD2Q14140 314 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF765Q7L2R6 523 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF627Q7L945 461 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GPC2Q8N158 579 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FAM26EQ8N5C1 309 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 OR4D5Q8NGN0 318 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GPR152Q8TDT2 470 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FAM46BQ96A09 425 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 PRRC1Q96M27 445 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF385DQ9H6B1 395 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 BCAS3Q9H6U6 928 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RASD1Q9Y272 281 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GNG10P50151 68 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CAV2P51636 162 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MZT1Q08AG7 82 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CLEC12BQ2HXU8 276 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LDHDQ86WU2 507 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TEX29Q8N6K0 151 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 KCTD13Q8WZ19 329 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SYT11Q9BT88 431 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TRAV34A0A0B4J273 112 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 POM121BA6NF01 834 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 FMO6PO60774 539 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CLDN1O95832 211 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LAMP2P13473 410 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SSTR2P30874 369 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 AQP2P41181 271 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 BUD31P41223 144 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GSK3AP49840 483 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TIGITQ495A1 244 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MDGA2Q7Z553 956 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC35E3Q7Z769 313 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 REM2Q8IYK8 340 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 GALNT16Q8N428 558 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF668Q96K58 619 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 WIPI2Q9Y4P8 454 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 KCNMB2Q9Y691 235 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 C19orf67A6NJJ6 358 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CDRT15L2A8MXV6 281 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 VAMP5O95183 116 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 RHOCP08134 193 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CTXN2P0C2S0 81 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 KCTD18Q6PI47 426 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CLEC18BQ6UXF7 455 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TP53I13Q8NBR0 393 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM106AQ96A25 262 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SDF2Q99470 211 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 TINAGL1Q9GZM7 467 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-202ENST00000344113 MFSD1Q9H3U5 465 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 CHODLQ9H9P2 273 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 LAMTOR3Q9UHA4 124 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 SLC35A3Q9Y2D2 325 aa3.49□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF256Q9Y2P7 627 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms