RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OR4C3Q8NH37 302 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 DHRS1Q96LJ7 313 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 TSPAN10Q9H1Z9 355 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 MAN2C1Q9NTJ4 1040 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 C20orf141Q9NUB4 165 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 COPS3Q9UNS2 423 aa6.59□□□□□ -1.35
VCAN-202ENST00000342785 UBE2J1Q9Y385 318 aaPredicted RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 XIRP1Q702N8 1843 aaKnown RBP6.59□□□□□ -1.35
VCAN-202ENST00000342785 EIF4E2O60573 245 aaKnown RBP6.59□□□□□ -1.36
VCAN-202ENST00000342785 DIRAS3O95661 229 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 PDGFAP04085 211 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 ZNF16P17020 682 aaPredicted RBP6.59□□□□□ -1.36
VCAN-202ENST00000342785 OTX2P32243 289 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 ACKR1Q16570 336 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 NKAIN2Q5VXU1 208 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 HEPHL1Q6MZM0 1159 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 STEAP2Q8NFT2 490 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 COX14Q96I36 57 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 OR2A5Q96R48 311 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 CCNL2Q96S94 520 aaPredicted RBP6.59□□□□□ -1.36
VCAN-202ENST00000342785 C1orf198Q9H425 327 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 REV1Q9UBZ9 1251 aa6.59□□□□□ -1.36
VCAN-202ENST00000342785 PTRH2Q9Y3E5 179 aaKnown RBP6.59□□□□□ -1.36
VCAN-202ENST00000342785 LY75O60449 1722 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 P2RY10O00398 339 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SSX4O60224 188 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 GREM1O60565 184 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SYNGR4O95473 234 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CD27P26842 260 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 BDKRB2P30411 391 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 C17orf67Q0P5P2 114 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 INSL4Q14641 139 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SLC25A35Q3KQZ1 300 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ZNF585AQ6P3V2 769 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 TMPRSS11FQ6ZWK6 438 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 P4HA3Q7Z4N8 544 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ARIH2OSQ8N7S6 290 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CCDC54Q8NEL0 328 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 FAM174AQ8TBP5 190 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 TSLPQ969D9 159 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ZNF775Q96BV0 537 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 SORCS2Q96PQ0 1159 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SYT3Q9BQG1 590 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 C20orf85Q9H1P6 137 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ASF1BQ9NVP2 202 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 STEAP1Q9UHE8 339 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 MICAL3Q7RTP6 2002 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 C2orf72A6NCS6 295 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 M0QYG6 137 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 AKR7A2O43488 359 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 GPNMBQ14956 572 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 GLYR1Q49A26 553 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 C9orf50Q5SZB4 431 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 OPN5Q6U736 354 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 GLCCI1Q86VQ1 547 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CMTM4Q8IZR5 234 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 TP53I13Q8NBR0 393 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 SPTSSAQ969W0 71 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 LRFN5Q96NI6 719 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 DERL3Q96Q80 235 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SLC19A3Q9BZV2 496 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CYSLTR2Q9NS75 346 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 PLEKHJ1Q9NW61 149 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CGGBP1Q9UFW8 167 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 QSER1Q2KHR3 1735 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ASXL3Q9C0F0 2248 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 IGHV3-20A0A0C4DH32 117 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 RAF1P04049 648 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ZNF28P17035 718 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 MVDP53602 400 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 BIDP55957 195 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 RPL18Q07020 188 aaKnown RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 PRAMEF20Q5VT98 475 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 GRINAQ7Z429 371 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 OR4D11Q8NGI4 311 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 RSPRY1Q96DX4 576 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ATF6BQ99941 703 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 COA3Q9Y2R0 106 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 A0A1W2PS29 197 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 TMEM221A6NGB7 291 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 AIPO00170 330 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SCRG1O75711 98 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 MT-ATP6P00846 226 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 HRGP04196 525 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SDHAP31040 664 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CLDN20P56880 219 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 TAS2R20P59543 309 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 FXYD4P59646 89 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 RPL27P61353 136 aaKnown RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 TNK1Q13470 666 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ZXDCQ2QGD7 858 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 SFTPA1Q8IWL2 248 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 OR5D18Q8NGL1 313 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ACKR4Q9NPB9 350 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 FBXO34Q9NWN3 711 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 EMC3Q9P0I2 261 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 B4GALT7Q9UBV7 327 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 MN1Q10571 1320 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 GREB1LQ9C091 1923 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms