RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 OR5AS1Q8N127 324 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 BAHD1Q8TBE0 780 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 DEDD2Q8WXF8 326 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 RASD2Q96D21 266 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CCDC74BQ96LY2 380 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF583Q96ND8 569 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 DUSP22Q9NRW4 184 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CLN5O75503 358 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 NCR1O76036 304 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CD22P20273 847 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 ELAVL4P26378 380 aaKnown RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 GCAP28676 217 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 OLIG3Q7RTU3 272 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 MKRN2Q9H000 416 aaKnown RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 PLCXD1Q9NUJ7 323 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 OR52A1Q9UKL2 312 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 GABARAPH6UMI1 98 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF254O75437 659 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 GABARAPO95166 117 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CNIH1O95406 144 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 FPR3P25089 353 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 GABRA5P31644 462 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 DLX5P56178 289 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 DUSP5Q16690 384 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 SMIM15Q7Z3B0 74 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 TMEM185AQ8NFB2 350 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 PLRG1O43660 514 aaKnown RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A6P0DMU7 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A5P0DMU8 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A7P0DMV0 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A8P0DMV1 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A9P0DMV2 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 SNRPBP14678 240 aaKnown RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A2Q5DJT8 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A1Q5HYN5 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CT45A3Q8NHU0 189 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 CCL4L1Q8NHW4 92 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 RBMXL1Q96E39 390 aaKnown RBP13.8□□□□□ -0.2
UBE3B-202ENST00000342494 ABHD6Q9BV23 337 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 RTL8AQ9BWD3 113 aa13.8□□□□□ -0.2
UBE3B-202ENST00000342494 OR6C76A6NM76 312 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 CLEC3BP05452 202 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 HTR2BP41595 481 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 OR8G1Q15617 311 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 RETREG3Q86VR2 466 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 EXD3Q8N9H8 876 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 RNF170Q96K19 258 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 COA3Q9Y2R0 106 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 HRH3Q9Y5N1 445 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 CRYAAP02489 173 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 RAB4AP20338 218 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MFGE8Q08431 387 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 GALEQ14376 348 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 BCL7CQ8WUZ0 217 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MYH7P12883 1935 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 SLC22A23A1A5C7 686 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 DSCR3O14972 297 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 CR2P20023 1033 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 ALKBH1Q13686 389 aaKnown RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 SLC35A4Q96G79 324 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 C17orf112F2Z3M2 114 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 M0R082 166 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MAP2K6P52564 334 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 RPL11P62913 178 aaKnown RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 TMEM196Q5HYL7 178 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 DCLRE1CQ96SD1 692 aaKnown RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 EMC6Q9BV81 110 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 TMEM38AQ9H6F2 299 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MUTYHQ9UIF7 546 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 C19orf53Q9UNZ5 99 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 NWD2Q9ULI1 1742 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MYH3P11055 1940 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 HSBP1L1C9JCN9 74 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 H0YIG0 161 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 DEGS1O15121 323 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 GSK3AP49840 483 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 DAPP51397 102 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 ILKQ13418 452 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MRPL58Q14197 206 aaKnown RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 FXNQ16595 210 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 CST9LP1Q5W188 147 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.79□□□□□ -0.2
UBE3B-202ENST00000342494 MORN4Q8NDC4 146 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 WBP2Q969T9 261 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 PRR14Q9BWN1 585 aa13.79□□□□□ -0.2
UBE3B-202ENST00000342494 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 CLDN1O95832 211 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 TMEM11P17152 192 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 RAB6AP20340 208 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 THBS3P49746 956 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 RAB11AP62491 216 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 ADPRMQ3LIE5 342 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 LHX8Q68G74 356 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 CD300LGQ6UXG3 332 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 SLC43A2Q8N370 569 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 SLC2A1P11166 492 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms