RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MYO16Q9Y6X6 1858 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SHISA3A0PJX4 238 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 SRPX2O60687 465 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 DNAJB6O75190 326 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 CXCL10P02778 98 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 PI3P19957 117 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 C21orf58P58505 322 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 FGL1Q08830 312 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 HACD4Q5VWC8 232 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 EIF5AL1Q6IS14 154 aaKnown RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 ABHD12BQ7Z5M8 362 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 ZAR1Q86SH2 424 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 OR4K17Q8NGC6 315 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 OR10R2Q8NGX6 335 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 VRK1Q99986 396 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 TMEM231Q9H6L2 316 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 PTTG3PQ9NZH4 202 aa11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
SNRNP48-201ENST00000342415 EP300Q09472 2414 aaPredicted RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 TCRBV16S1A1N1A0A5B0 115 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 TPOP07202 933 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 DIO1P49895 249 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 MRPS10P82664 201 aaKnown RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 CHRFAM7AQ494W8 412 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 PRAMEF8Q5VWM4 474 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 PRAMEF7Q5VXH5 474 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 PARM1Q6UWI2 310 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 DPY19L2P2Q6ZN68 376 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 STX12Q86Y82 276 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 OR13H1Q8NG92 308 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 SMIM4Q8WVI0 70 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 WDR34Q96EX3 536 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 ARHGDIGQ99819 225 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 C14orf166Q9Y224 244 aaKnown RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 LSM5Q9Y4Y9 91 aaKnown RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 LEUTXA8MZ59 168 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 P2RY10O00398 339 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 IMPA2O14732 288 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 GLCEO94923 617 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 CFIP05156 583 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 PTBP1P26599 531 aaKnown RBP eCLIP11.37□□□□□ -0.593e-6■■■■■ 31
SNRNP48-201ENST00000342415 CBX5P45973 191 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 FXYD4P59646 89 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 RLFQ13129 1914 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 STAC2Q6ZMT1 411 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 OR51Q1Q8NH59 317 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 HSD17B8Q92506 261 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 DAZLQ92904 295 aaKnown RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 DLL4Q9NR61 685 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 SERINC1Q9NRX5 453 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 MEMO1Q9Y316 297 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 CCDC163A0A0D9SF12 145 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 AIPO00170 330 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 TNFSF12O43508 249 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 ERCC1P07992 297 aaPredicted RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 HTR2CP28335 458 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 ADPRHP54922 357 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 TAS2R19P59542 299 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 CSNK2A1P68400 391 aaPredicted RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 AGBL4Q5VU57 503 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 FBXO42Q6P3S6 717 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 CSNK2A3Q8NEV1 391 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 OR6M1Q8NGM8 313 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 MS4A7Q9GZW8 240 aaPredicted RBP11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 POFUT1Q9H488 388 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 KCNG2Q9UJ96 466 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 FBXO4Q9UKT5 387 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 SLC22A7Q9Y694 548 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 CACNA1GO43497 2377 aa11.37□□□□□ -0.59
SNRNP48-201ENST00000342415 LINC01553A4QN01 128 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 SIGLEC5O15389 551 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 THBS1P07996 1170 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 TAGLNQ01995 201 aaKnown RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 SIGLEC14Q08ET2 396 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 GSG1Q2KHT4 349 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 C9orf62Q8N4C0 152 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 RFLNBQ8N5W9 214 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 OR11A1Q9GZK7 315 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 SERTAD3Q9UJW9 196 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 TEX51A0A1B0GUA7 166 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 NPIPB8E9PQR5 432 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 SSX5O60225 188 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 KCNJ13O60928 360 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 IFNGR1P15260 489 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 DHPSP49366 369 aaPredicted RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF41P51814 821 aaPredicted RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 EOGTQ5NDL2 527 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 TRAPPC6BQ86SZ2 158 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF440Q8IYI8 595 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 OR4C16Q8NGL9 310 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 TOE1Q96GM8 510 aaKnown RBP11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 OR1F2PQ96R84 312 aa11.36□□□□□ -0.59
SNRNP48-201ENST00000342415 ZNF587Q96SQ5 575 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms