RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 A6NL46 340 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 ZNF879B4DU55 563 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 FAM47E-STBD1D6RA91 191 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 ZFPL1O95159 310 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 OR8G3PP0DMU2 310 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 SRMP19623 302 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 MMP15P51511 669 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 NTRK2Q16620 822 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 LCN10Q6JVE6 187 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 SLC29A4Q7RTT9 530 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 ANKRD37Q7Z713 158 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 MARCH3Q86UD3 253 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 OR1N1Q8NGS0 311 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 CDC6Q99741 560 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 C12orf10Q9HB07 376 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 MRM2Q9UI43 246 aaKnown RBP13.58□□□□□ -0.24
TPM3-208ENST00000341485 MRPS7Q9Y2R9 242 aaKnown RBP13.58□□□□□ -0.24
TPM3-208ENST00000341485 SEC16AO15027 2179 aa13.58□□□□□ -0.24
TPM3-208ENST00000341485 ASCC3Q8N3C0 2202 aaKnown RBP13.57□□□□□ -0.24
TPM3-208ENST00000341485 IGHV3-20A0A0C4DH32 117 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 ANKRD61A6NGH8 418 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 B4E171 279 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.57□□□□□ -0.24
TPM3-208ENST00000341485 HCRTR2O43614 444 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 TSPAN2O60636 221 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 UPK3AO75631 287 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 RPP14O95059 124 aaKnown RBP13.57□□□□□ -0.24
TPM3-208ENST00000341485 WISP1O95388 367 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 BGLAPP02818 100 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 IL12BP29460 328 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 TSPAN7P41732 249 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 SLC6A8P48029 635 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 NR0B1P51843 470 aaKnown RBP13.57□□□□□ -0.24
TPM3-208ENST00000341485 DCAF7P61962 342 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 SLC6A19Q695T7 634 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 CDC20BQ86Y33 519 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 LIX1LQ8IVB5 337 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 MR1Q95460 341 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 MAP6Q96JE9 813 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
TPM3-208ENST00000341485 ZFP3Q96NJ6 502 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 CRB3Q9BUF7 120 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 GRHPRQ9UBQ7 328 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 CAMK2AQ9UQM7 478 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 LOXL2Q9Y4K0 774 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 TVP23AA6NH52 213 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 ABHD16AO95870 558 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 ADRB1P08588 477 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 PITPNAQ00169 270 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 YIF1BQ5BJH7 314 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 EMC4Q5J8M3 183 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 UBE2NLQ5JXB2 153 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 HES5Q5TA89 166 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 NUP54Q7Z3B4 507 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 SIAH3Q8IW03 269 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 IZUMO1Q8IYV9 350 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 CMTM4Q8IZR5 234 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 OR6V1Q8N148 313 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 ZNF671Q8TAW3 534 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 AKAP1Q92667 903 aaKnown RBP eCLIP13.57□□□□□ -0.248e-7■■■■□ 24.6
TPM3-208ENST00000341485 DNAJA3Q96EY1 480 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 TSPAN10Q9H1Z9 355 aaPredicted RBP13.57□□□□□ -0.24
TPM3-208ENST00000341485 SLC26A1Q9H2B4 701 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 FKRPQ9H9S5 495 aa13.57□□□□□ -0.24
TPM3-208ENST00000341485 A0A0A6YYJ9 748 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 OR6C76A6NM76 312 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 LCN1P31025 176 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 EVI2BP34910 448 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 INSM1Q01101 510 aaPredicted RBP13.56□□□□□ -0.24
TPM3-208ENST00000341485 CCDC92Q53HC0 331 aaPredicted RBP13.56□□□□□ -0.24
TPM3-208ENST00000341485 DCAF12Q5T6F0 453 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 C1QL3Q5VWW1 255 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 POMZP3Q6PJE2 187 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 TOMM5Q8N4H5 51 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 PMEPA1Q969W9 287 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 SPSB2Q99619 263 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 WWTR1Q9GZV5 400 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 C19orf25Q9UFG5 118 aaPredicted RBP13.56□□□□□ -0.24
TPM3-208ENST00000341485 PCNX3Q9H6A9 2034 aa13.56□□□□□ -0.24
TPM3-208ENST00000341485 IFITM5A6NNB3 132 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ALG1L2C9J202 215 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 C9J4A7 227 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 PDCD5O14737 125 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 TO15178 435 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 AKR7A3O95154 331 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 C1QBP02746 253 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ITPKBP27987 946 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 GZMKP49863 264 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 PLCXD2Q0VAA5 305 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 FAPQ12884 760 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 ALKBH1Q13686 389 aaKnown RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 CSRP2Q16527 193 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 BCL2L15Q5TBC7 163 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 LIPNQ5VXI9 398 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 BICRALQ6AI39 1079 aa13.55□□□□□ -0.24
TPM3-208ENST00000341485 MRPL14Q6P1L8 145 aaKnown RBP13.55□□□□□ -0.24
TPM3-208ENST00000341485 FAM199XQ6PEV8 388 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms