RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 ZNF879B4DU55 563 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 GPRIN2O60269 458 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 NUDT14O95848 222 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 ADRB1P08588 477 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 H2AFB2P0C5Z0 115 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 CXCR1P25024 350 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 PITPNAQ00169 270 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 OTPQ5XKR4 325 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 C16orf47Q6ZP98 133 aaPredicted RBP18.2■□□□□ 0.5
SPG7-202ENST00000341316 PRSS45Q7RTY3 260 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 TMPRSS9Q7Z410 1059 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 IZUMO1Q8IYV9 350 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 SPEM1Q8N4L4 309 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 ZNF441Q8N8Z8 693 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 LGALS14Q8TCE9 139 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 ADAD1Q96M93 576 aaKnown RBP18.2■□□□□ 0.5
SPG7-202ENST00000341316 TBL1XR1Q9BZK7 514 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 HEXA-AS1Q9H8Q6 139 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 WDR76Q9H967 626 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 FKRPQ9H9S5 495 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 NUP210LQ5VU65 1888 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 AKR7A3O95154 331 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 ABHD16AO95870 558 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 SHBQ15464 509 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 TOR2AQ5JU69 321 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 LIPNQ5VXI9 398 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 CDC20BQ86Y33 519 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 MRPL48Q96GC5 212 aaKnown RBP18.2■□□□□ 0.5
SPG7-202ENST00000341316 PTDSS2Q9BVG9 487 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 SYT4Q9H2B2 425 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 AUNIPQ9H7T9 357 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 BEX1Q9HBH7 125 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 FRRS1LQ9P0K9 344 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 COPZ2Q9P299 210 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 COPS7AQ9UBW8 275 aa18.2■□□□□ 0.5
SPG7-202ENST00000341316 GPR171O14626 319 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 HIST1H2ABP04908 130 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 EMC4Q5J8M3 183 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 HES5Q5TA89 166 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 COX15Q7KZN9 410 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 HIST3H2AQ7L7L0 130 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 NUP54Q7Z3B4 507 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 PRSS42Q7Z5A4 293 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 HIST1H2ACQ93077 130 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 SPATA2Q9UM82 520 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 COL5A1P20908 1838 aaPredicted RBP18.19■□□□□ 0.5
SPG7-202ENST00000341316 TP53BP1Q12888 1972 aaPredicted RBP18.19■□□□□ 0.5
SPG7-202ENST00000341316 A0A1W2PQD3 144 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 LINC00862A6NCI5 91 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 C11orf98E9PRG8 122 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 ZNF593O00488 134 aaPredicted RBP18.19■□□□□ 0.5
SPG7-202ENST00000341316 KLF9Q13886 244 aaPredicted RBP18.19■□□□□ 0.5
SPG7-202ENST00000341316 STPG1Q5TH74 334 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 BTN2A1Q7KYR7 527 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 SLC29A4Q7RTT9 530 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 PM20D2Q8IYS1 436 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 PTTG3PQ9NZH4 202 aa18.19■□□□□ 0.5
SPG7-202ENST00000341316 ING1Q9UK53 422 aaPredicted RBP18.19■□□□□ 0.5
SPG7-202ENST00000341316 PCDHGA9Q9Y5G4 932 aaKnown RBP18.19■□□□□ 0.5
SPG7-202ENST00000341316 TRABD2BA6NFA1 517 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 ADAM10O14672 748 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 LCN1P31025 176 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 EEF1A1P5Q5VTE0 462 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 HGDQ93099 445 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 SLC25A36Q96CQ1 311 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 ATXN7L1Q9ULK2 861 aaPredicted RBP18.18■□□□□ 0.5
SPG7-202ENST00000341316 CAMK2AQ9UQM7 478 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 TRAV36DV7A0A075B6V5 113 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 MEIKINA0A087WXM9 373 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 ANKRD61A6NGH8 418 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 FADS1O60427 444 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 EIF4E2O60573 245 aaKnown RBP18.18■□□□□ 0.5
SPG7-202ENST00000341316 PLGP00747 810 aaPredicted RBP18.18■□□□□ 0.5
SPG7-202ENST00000341316 SULT1A3P0DMM9 295 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 SULT1A4P0DMN0 295 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 AP2S1P53680 142 aaPredicted RBP18.18■□□□□ 0.5
SPG7-202ENST00000341316 PNLIPRP2P54317 469 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 SLC6A19Q695T7 634 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 WDR74Q6RFH5 385 aaPredicted RBP18.18■□□□□ 0.5
SPG7-202ENST00000341316 DPY19L4Q7Z388 723 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 SLC38A9Q8NBW4 561 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 OR2T4Q8NH00 348 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 ZNF671Q8TAW3 534 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 CCDC74AQ96AQ1 378 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 WNT16Q9UBV4 365 aa18.18■□□□□ 0.5
SPG7-202ENST00000341316 PCNX3Q9H6A9 2034 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 K7ESF4 209 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 SSNA1O43805 119 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 CDC40O60508 579 aaKnown RBP eCLIP18.17■□□□□ 0.5
SPG7-202ENST00000341316 SSTR2P30874 369 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 SNTB2Q13425 540 aaKnown RBP18.17■□□□□ 0.5
SPG7-202ENST00000341316 CAMK2DQ13557 499 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 COL28A1Q2UY09 1125 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 LGALSLQ3ZCW2 172 aaPredicted RBP18.17■□□□□ 0.5
SPG7-202ENST00000341316 SMUG1Q53HV7 270 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 PTCRAQ6ISU1 281 aaPredicted RBP18.17■□□□□ 0.5
SPG7-202ENST00000341316 CMTM4Q8IZR5 234 aa18.17■□□□□ 0.5
SPG7-202ENST00000341316 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
SPG7-202ENST00000341316 ZNF433Q8N7K0 673 aaPredicted RBP18.17■□□□□ 0.5
SPG7-202ENST00000341316 OR6N2Q8NGY6 317 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms