RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MAGED1Q9Y5V3 778 aaPredicted RBP13.43□□□□□ -0.26
VAPA-201ENST00000340541 V9GYQ6 96 aa13.43□□□□□ -0.26
VAPA-201ENST00000340541 FN1P02751 2386 aaKnown RBP13.43□□□□□ -0.26
VAPA-201ENST00000340541 A0A1W2PRQ8 180 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 ZNF99A8MXY4 864 aaPredicted RBP13.42□□□□□ -0.26
VAPA-201ENST00000340541 hCG_2039718K7EN88 272 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 GMNNO75496 209 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 SEC14L2O76054 403 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 WNT11O96014 354 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 PGA4P0DJD7 388 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 PGA3P0DJD8 388 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
VAPA-201ENST00000340541 RHCEP18577 417 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 CALB2P22676 271 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 CSNK1A1P48729 337 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 TUBA1BP68363 451 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 TUBA4AP68366 448 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 RUNX1T1Q06455 604 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 DGCR6Q14129 220 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 LAPTM4AQ15012 233 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 PGGHGQ32M88 737 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 KLHL24Q6TFL4 600 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 MBOAT2Q6ZWT7 520 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 TUBA1AQ71U36 451 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 RNF113BQ8IZP6 322 aaKnown RBP13.42□□□□□ -0.26
VAPA-201ENST00000340541 LRRC75AQ8NAA5 344 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 OR6N1Q8NGY5 312 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 SLC7A13Q8TCU3 470 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 BCAS4Q8TDM0 211 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 FBXW5Q969U6 566 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 SLC25A44Q96H78 314 aaPredicted RBP13.42□□□□□ -0.26
VAPA-201ENST00000340541 DHRS1Q96LJ7 313 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 NSMCE2Q96MF7 247 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 FUZQ9BT04 418 aa13.42□□□□□ -0.26
VAPA-201ENST00000340541 CRNNQ9UBG3 495 aaPredicted RBP13.42□□□□□ -0.26
VAPA-201ENST00000340541 HIVEP2P31629 2446 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 IGHV1-18A0A0C4DH31 117 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 DIRAS1O95057 198 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 BCL10O95999 233 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 H1F0P07305 194 aaKnown RBP13.41□□□□□ -0.26
VAPA-201ENST00000340541 SOD3P08294 240 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 HIST3H3Q16695 136 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 ARMC4Q5T2S8 1044 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 PODNL1Q6PEZ8 512 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 LRFN4Q6PJG9 635 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 B3GLCTQ6Y288 498 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 ZNF730Q6ZMV8 503 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 TMPRSS11FQ6ZWK6 438 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 CYP4Z1Q86W10 505 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 ASB10Q8WXI3 467 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 ZNF566Q969W8 418 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 RADILQ96JH8 1075 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 MRPL13Q9BYD1 178 aaKnown RBP13.41□□□□□ -0.26
VAPA-201ENST00000340541 ULBP2Q9BZM5 246 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 B3GAT2Q9NPZ5 323 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 TAS2R1Q9NYW7 299 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 GLTPQ9NZD2 209 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 MGAT4BQ9UQ53 548 aa13.41□□□□□ -0.26
VAPA-201ENST00000340541 TRBV4-1A0A0J9YWV2 114 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 A0A1W2PRG6 482 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 NPIPB13A6NJU9 1138 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 NPIPB4C9JG80 1138 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 E7EQL1 145 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 CDC42EP2O14613 210 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 IGLV1-44P01699 117 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 CDH11P55287 796 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 UBE2NP61088 152 aaKnown RBP13.4□□□□□ -0.26
VAPA-201ENST00000340541 PPP2R2BQ00005 443 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 SEC23BQ15437 767 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 MYPOPQ86VE0 399 aaPredicted RBP13.4□□□□□ -0.26
VAPA-201ENST00000340541 ARHGAP24Q8N264 748 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 FAM169BQ8N8A8 192 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 OR13C2Q8NGS9 318 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 SMAP2Q8WU79 429 aaPredicted RBP13.4□□□□□ -0.26
VAPA-201ENST00000340541 NMD3Q96D46 503 aaKnown RBP13.4□□□□□ -0.26
VAPA-201ENST00000340541 TNFRSF13CQ96RJ3 184 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 SEC61A2Q9H9S3 476 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 B3GNT2Q9NY97 397 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 CISD1Q9NZ45 108 aaKnown RBP13.4□□□□□ -0.26
VAPA-201ENST00000340541 ZNF224Q9NZL3 707 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 ACTR3BQ9P1U1 418 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 LAMP3Q9UQV4 416 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 FAM32AQ9Y421 112 aaKnown RBP13.4□□□□□ -0.26
VAPA-201ENST00000340541 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
VAPA-201ENST00000340541 ZANQ9Y493 2812 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 TRAV27A0A087WT01 109 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 TCRBV5S2A0A599 114 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 TRIM64A6NGJ6 449 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 TRIM64BA6NI03 449 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 EFCAB9A8MZ26 197 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 OVOL3O00110 214 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 SMAD7O15105 426 aaKnown RBP13.39□□□□□ -0.27
VAPA-201ENST00000340541 IGKV3-15P01624 115 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 CD8AP01732 235 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 IGHMP01871 453 aa13.39□□□□□ -0.27
VAPA-201ENST00000340541 SAGP10523 405 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms