RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DHRS12A0PJE2 317 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 NPIPB13A6NJU9 1138 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF99A8MXY4 864 aaPredicted RBP13.35□□□□□ -0.27
UBE3B-201ENST00000340074 NPIPB4C9JG80 1138 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 TNFRSF11BO00300 401 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 OR10H3O60404 316 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 SEC14L2O76054 403 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 PLAUP00749 431 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 IGHG1P01857 330 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ACADSP16219 412 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF26P17031 533 aaPredicted RBP13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ERFP50548 548 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF83P51522 516 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 HMGA2P52926 109 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 CLRN1P58418 232 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 PRPS1P60891 318 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 PPP1R8Q12972 351 aaKnown RBP13.35□□□□□ -0.27
UBE3B-201ENST00000340074 TOP3AQ13472 1001 aaPredicted RBP13.35□□□□□ -0.27
UBE3B-201ENST00000340074 NCMAPQ5T1S8 102 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ZER1Q7Z7L7 766 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 SPATA24Q86W54 205 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 LRMDAQ9H2I8 198 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 ZNF346Q9UL40 294 aaKnown RBP13.35□□□□□ -0.27
UBE3B-201ENST00000340074 SIGLEC7Q9Y286 467 aa13.35□□□□□ -0.27
UBE3B-201ENST00000340074 DPRXA6NFQ7 191 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 PTP4A3O75365 173 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 IGHMP01871 453 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 RPL4P36578 427 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 RPL27P61353 136 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 MYBPC1Q00872 1141 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 BSPH1Q075Z2 132 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 TAF11Q15544 211 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 OR2T5Q6IEZ7 315 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 LRFN4Q6PJG9 635 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 HDDC2Q7Z4H3 204 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 CDH24Q86UP0 819 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 SYT14Q8NB59 555 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 NOXO1Q8NFA2 376 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 OR2T29Q8NH02 315 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 HDAC2Q92769 488 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 TSPAN32Q96QS1 320 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 CHID1Q9BWS9 393 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 MRPL13Q9BYD1 178 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 MMADHCQ9H3L0 296 aaPredicted RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 VNN3Q9NY84 501 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 STX18Q9P2W9 335 aaKnown RBP13.34□□□□□ -0.27
UBE3B-201ENST00000340074 POFUT2Q9Y2G5 429 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 U3KQV3 271 aa13.34□□□□□ -0.27
UBE3B-201ENST00000340074 TCRBV3S1A0A5B6 114 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 UNC119BA6NIH7 251 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 CENPBD1B2RD01 187 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 M0R1B8 84 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 WNT11O96014 354 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 CD3EP07766 207 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 QDPRP09417 244 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 IFNGR2P38484 337 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 UBE2NP61088 152 aaKnown RBP13.33□□□□□ -0.28
UBE3B-201ENST00000340074 ERVK-25P63136 954 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 TUBA1BP68363 451 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 TUBA4AP68366 448 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 HIST3H3Q16695 136 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF704Q6ZNC4 412 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-201ENST00000340074 CCDC121Q6ZUS5 278 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 TUBA1AQ71U36 451 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 OR4C15Q8NGM1 316 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 MAGEE2Q8TD90 523 aaPredicted RBP13.33□□□□□ -0.28
UBE3B-201ENST00000340074 MCHR2Q969V1 340 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 TMEM204Q9BSN7 226 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 REEP1Q9H902 201 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 OBP2BQ9NPH6 170 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 IL20RAQ9UHF4 553 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 ADAM18Q9Y3Q7 739 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 SAMHD1Q9Y3Z3 626 aaKnown RBP13.33□□□□□ -0.28
UBE3B-201ENST00000340074 RNF115Q9Y4L5 304 aa13.33□□□□□ -0.28
UBE3B-201ENST00000340074 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 NDUFB2O95178 105 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 CST1P01037 141 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 CD14P08571 375 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ACVR1BP36896 505 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 C1QTNF12Q5T7M4 302 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 C1orf94Q6P1W5 598 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 PGBD2Q6P3X8 592 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 KLHL17Q6TDP4 642 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 THSD4Q6ZMP0 1018 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF813Q6ZN06 617 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ASRGL1Q7L266 308 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF627Q7L945 461 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 OR9Q2Q8NGE9 314 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ZNF519Q8TB69 540 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 KCNK17Q96T54 332 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 FOXB1Q99853 325 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 UBTD1Q9HAC8 227 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 ST6GALNAC2Q9UJ37 374 aa13.32□□□□□ -0.28
UBE3B-201ENST00000340074 MAGED1Q9Y5V3 778 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms