RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 LPAR4Q99677 370 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 IGHG1P01857 330 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 TCRBP04435 133 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 ACSM4P0C7M7 580 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 STAG3L2P0CL84 134 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 PCBD1P61457 104 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 PPP2CBP62714 309 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 EDDM3AQ14507 147 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 TPGS2Q68CL5 300 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 HHIPQ96QV1 700 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 OR52A1Q9UKL2 312 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 CCSO14618 274 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 LDB3O75112 727 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 GLB1P16278 677 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 REEP5Q00765 189 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 GALNT2Q10471 571 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 DOC2BQ14184 412 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 SPANXN5Q5MJ07 72 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 OR2G6Q5TZ20 316 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 UTP4Q969X6 686 aaKnown RBP11.93□□□□□ -0.5
USP47-202ENST00000339865 CMBLQ96DG6 245 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 P4HTMQ9NXG6 502 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 CLTCQ00610 1675 aaKnown RBP11.93□□□□□ -0.5
USP47-202ENST00000339865 C4orf47A7E2U8 309 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 HS3ST1O14792 307 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 CNMDO75829 334 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 VNN1O95497 513 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 EDN1P05305 212 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 OR5G3P0C626 314 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 FCN2Q15485 313 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 NPSR1Q6W5P4 371 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 CNTN4Q8IWV2 1026 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 OR10J5Q8NHC4 309 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 CD1BP29016 333 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 RACK1P63244 317 aaKnown RBP11.93□□□□□ -0.5
USP47-202ENST00000339865 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
USP47-202ENST00000339865 NXT1Q9UKK6 140 aaKnown RBP11.93□□□□□ -0.5
USP47-202ENST00000339865 RNF150Q9ULK6 438 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 FREM3P0C091 2139 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 RNASET2O00584 256 aaKnown RBP11.93□□□□□ -0.5
USP47-202ENST00000339865 ADH4P08319 380 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 ENTPD8Q5MY95 495 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 DTWD2Q8NBA8 298 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 TSLPQ969D9 159 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 MUCL1Q96DR8 90 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 C1QTNF2Q9BXJ5 285 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 XYLT2Q9H1B5 865 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 PRO1933Q9H354 126 aa11.93□□□□□ -0.5
USP47-202ENST00000339865 F13BP05160 661 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 MMP7P09237 267 aaPredicted RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 SLURP2P0DP57 97 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 RPL29P47914 159 aaKnown RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 HTRA3P83110 453 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 TRIB1Q96RU8 372 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 VAPAQ9P0L0 249 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 JTBO76095 146 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 DUSP1P28562 367 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 SUB1P53999 127 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP47-202ENST00000339865 WDR5P61964 334 aaKnown RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 MS4A2Q01362 244 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ADPRMQ3LIE5 342 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 NHSL2Q5HYW2 709 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ANKRD53Q8N9V6 530 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 RHOXF1Q8NHV9 184 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ASB17Q8WXJ9 295 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 LMF2Q9BU23 707 aaKnown RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 MAF1Q9H063 256 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 DCAF13Q9NV06 445 aaKnown RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 FBXO34Q9NWN3 711 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 KCNG2Q9UJ96 466 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ANKRD31Q8N7Z5 1873 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 FBLL1A6NHQ2 334 aaKnown RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 ACP2P11117 423 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 PTGER1P34995 402 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 IDUAP35475 653 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ZNF516Q92618 1163 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ADOQ96SZ5 270 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 C17orf105B2RV13 164 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ZNF354AO60765 605 aaPredicted RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 F2P00734 622 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 HTR2CP28335 458 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ERVPABLB-1P60509 514 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 HOXC5Q00444 222 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 SMIM7Q9BQ49 75 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 CPEB1Q9BZB8 566 aaKnown RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 BCO1Q9HAY6 547 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 NECAP2Q9NVZ3 263 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 PMS2P11Q13670 270 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 C18orf21Q32NC0 220 aaPredicted RBP11.92□□□□□ -0.5
USP47-202ENST00000339865 LY6G5CQ5SRR4 150 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 TMEM175Q9BSA9 504 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 GSTO2Q9H4Y5 243 aa11.92□□□□□ -0.5
USP47-202ENST00000339865 NOX4Q9NPH5 578 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms