RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 C1QL3Q5VWW1 255 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 MARCH3Q86UD3 253 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 OR6V1Q8N148 313 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 D2HGDHQ8N465 521 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 OR6N2Q8NGY6 317 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 ATOH1Q92858 354 aaPredicted RBP14.77□□□□□ -0.04
LITAF-201ENST00000339430 SCMH1Q96GD3 660 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 FOXN4Q96NZ1 517 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 WDR76Q9H967 626 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 LIN7BQ9HAP6 207 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 FRRS1LQ9P0K9 344 aa14.77□□□□□ -0.04
LITAF-201ENST00000339430 FITM1A5D6W6 292 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 ZNF883P0CG24 379 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 PTHLHP12272 177 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 GDNFP39905 211 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 NR0B1P51843 470 aaKnown RBP14.77□□□□□ -0.05
LITAF-201ENST00000339430 PLCZ1Q86YW0 608 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 DNAAF1Q8NEP3 725 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 ZNF721Q8TF20 911 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 ADIPOR1Q96A54 375 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 MS4A3Q96HJ5 214 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 MAP6Q96JE9 813 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 NUDT9Q9BW91 350 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 NDEL1Q9GZM8 345 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 NKIRAS2Q9NYR9 191 aa14.77□□□□□ -0.05
LITAF-201ENST00000339430 CENPBD1B2RD01 187 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 AIPO00170 330 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 UPK3AO75631 287 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 DDAH2O95865 285 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 PLGP00747 810 aaPredicted RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 HIST1H2ABP04908 130 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 CXCL3P19876 107 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 STOMP27105 288 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 IL12BP29460 328 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 GALNSP34059 522 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 DUSP3P51452 185 aaPredicted RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 SLC25A1P53007 311 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SNTB2Q13425 540 aaKnown RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 KLF9Q13886 244 aaPredicted RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 HIST3H2AQ7L7L0 130 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 DPY19L4Q7Z388 723 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 TIGD4Q8IY51 512 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 OR5AK2Q8NH90 309 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 RPS4Y2Q8TD47 263 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 RHBDD1Q8TEB9 315 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SMIM4Q8WVI0 70 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 HIST1H2ACQ93077 130 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SLC25A38Q96DW6 304 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 GON7Q9BXV9 100 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SYT4Q9H2B2 425 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 ZNF768Q9H5H4 540 aaKnown RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 EXOSC3Q9NQT5 275 aaKnown RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 LAMP5Q9UJQ1 280 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 V9GY05 133 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 C7orf66A4D0T2 115 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 FRG2CA6NGY1 282 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 PDCD5O14737 125 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 TSC22D2O75157 780 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 AKR7A3O95154 331 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 TACSTD2P09758 323 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 PRKCAP17252 672 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 FOXL2P58012 376 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 ALKBH1Q13686 389 aaKnown RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 C1orf189Q5VU69 101 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SFRP4Q6FHJ7 346 aaPredicted RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 KMT5CQ86Y97 462 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SUMF1Q8NBK3 374 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 OR1L3Q8NH93 324 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 THEM6Q8WUY1 208 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 LIPHQ8WWY8 451 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 ADAMTS14Q8WXS8 1223 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SLC25A36Q96CQ1 311 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 COL25A1Q9BXS0 654 aaPredicted RBP14.76□□□□□ -0.05
LITAF-201ENST00000339430 MFRPQ9BY79 579 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 OR51J1Q9H342 316 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 RCE1Q9Y256 329 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 SLC6A5Q9Y345 797 aa14.76□□□□□ -0.05
LITAF-201ENST00000339430 IGHV5-10-1A0A0J9YXX1 117 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 TOX3O15405 576 aaPredicted RBP14.75□□□□□ -0.05
LITAF-201ENST00000339430 ITGA10O75578 1167 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 IGKV3-11P04433 115 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 DPP4P27487 766 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 HTR2BP41595 481 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 RPS15P62841 145 aaKnown RBP14.75□□□□□ -0.05
LITAF-201ENST00000339430 SLC6A19Q695T7 634 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 DBX2Q6ZNG2 339 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 LRRC69Q6ZNQ3 347 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 C9orf40Q8IXQ3 194 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 PM20D2Q8IYS1 436 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 OR8K3Q8NH51 312 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 GRPEL2Q8TAA5 225 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 GIMAP1Q8WWP7 306 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 SNAPC3Q92966 411 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 CCNL2Q96S94 520 aaPredicted RBP14.75□□□□□ -0.05
LITAF-201ENST00000339430 ULBP3Q9BZM4 244 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 TCF7L1Q9HCS4 588 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 SLCO1C1Q9NYB5 712 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 MOKQ9UQ07 419 aa14.75□□□□□ -0.05
LITAF-201ENST00000339430 FER1L5A0AVI2 2057 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms