RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 EDEM2Q9BV94 578 aa6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 MRM2Q9UI43 246 aaKnown RBP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.35
SRFBP1-201ENST00000339397 B4E171 279 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 PFDN1O60925 122 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 SC5DO75845 299 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 RGS9O75916 674 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 ZFPL1O95159 310 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 OR6A2O95222 327 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 APEHP13798 732 aaKnown RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF12P17014 697 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 EDNRAP25101 427 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 FOLR3P41439 243 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TSPAN7P41732 249 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 GPR85P60893 370 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 POU3F1Q03052 451 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 LGALS3BPQ08380 585 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 PUDPQ08623 228 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 POU4F2Q12837 409 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 CDK5R1Q15078 307 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TRIM16LQ309B1 348 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TMEM176BQ3YBM2 270 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 UBE2J2Q8N2K1 259 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC43A2Q8N370 569 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 POMGNT2Q8NAT1 580 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 OR51A4Q8NGJ6 313 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 OR10AC1Q8NH08 325 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 RGP1Q92546 391 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 DTNBP1Q96EV8 351 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 DIRAS2Q96HU8 199 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 COX4I2Q96KJ9 171 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 NKX3-1Q99801 234 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 SPOCK3Q9BQ16 436 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 MROQ9BYG7 248 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 SPRY4Q9C004 299 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TXNIPQ9H3M7 391 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 PALMDQ9NP74 551 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 INPP5EQ9NRR6 644 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 NXT1Q9UKK6 140 aaKnown RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 CLEC4AQ9UMR7 237 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 B9D1Q9UPM9 204 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 B3GNT3Q9Y2A9 372 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 NOX1Q9Y5S8 564 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 IQCMA0A1B0GVH7 501 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC22A23A1A5C7 686 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 ACOD1A6NK06 481 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 LIPT2A6NK58 231 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TAF4O00268 1085 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF593O00488 134 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 XKRYO14609 159 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 OGG1O15527 345 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 MT-ATP6P00846 226 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 NAGAP17050 411 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 APEX1P27695 318 aaKnown RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 APOBEC1P41238 236 aaKnown RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 DNASE1L1P49184 302 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF41P51814 821 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC25A1P53007 311 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 BDH1Q02338 343 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TLE3Q04726 772 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 CLPPQ16740 277 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 IDNKQ5T6J7 187 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 C6orf15Q6UXA7 325 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 LRRN1Q6UXK5 716 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 NDUFAF7Q7L592 441 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 GPAT4Q86UL3 456 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 MISPQ8IVT2 679 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 GPALPP1Q8IXQ4 340 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 OR8H2Q8N162 312 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 TMEM156Q8N614 296 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 POC5Q8NA72 575 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 ST8SIA1Q92185 356 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 OR5B2Q96R09 309 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 MRPL39Q9NYK5 338 aaKnown RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 FRRS1LQ9P0K9 344 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 B3GAT1Q9P2W7 334 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 COA3Q9Y2R0 106 aaPredicted RBP6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 CMAHPQ9Y471 501 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 GVINP1Q7Z2Y8 2422 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 DNAJC13O75165 2243 aa6.64□□□□□ -1.35
SRFBP1-201ENST00000339397 IGHV3-15A0A0B4J1V0 119 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PIN1P1O15428 100 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 UPK3AO75631 287 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ALOX5APP20292 161 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 TMED10P49755 219 aaKnown RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ACTC1P68032 377 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ACTA1P68133 377 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 ZNF45Q02386 682 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 MFAP5Q13361 173 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 GPR50Q13585 617 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 TAB1Q15750 504 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC35D3Q5M8T2 416 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 STPG1Q5TH74 334 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CORO6Q6QEF8 472 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 H1FNTQ75WM6 255 aaPredicted RBP6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SLC16A9Q7RTY1 509 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 PXKQ7Z7A4 578 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 CDC20BQ86Y33 519 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 SUMF1Q8NBK3 374 aa6.63□□□□□ -1.35
SRFBP1-201ENST00000339397 OR2T4Q8NH00 348 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms