RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 JTBO76095 146 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SNRPCP09234 159 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ATF1P18846 271 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CMPK1P30085 196 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 NOVP48745 357 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 POLR2HP52434 150 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC35A1P78382 337 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 DGCR2P98153 550 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TGM3Q08188 693 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 C5orf64Q2M2E5 130 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FAM174BQ3ZCQ3 159 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 COA6Q5JTJ3 125 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR4A47Q6IF82 309 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CD300LDQ6UXZ3 194 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF664Q8N3J9 261 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TCTEX1D1Q8N7M0 179 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TCEANCQ8N8B7 351 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR4A4PQ8NGN8 299 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 C1orf216Q8TAB5 229 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RASD2Q96D21 266 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC41A2Q96JW4 573 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 IMMP2LQ96T52 175 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SMOQ99835 787 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TCEAL2Q9H3H9 227 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 HRH4Q9H3N8 390 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CBLN4Q9NTU7 201 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CNIH4Q9P003 139 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 JAG2Q9Y219 1238 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SNX11Q9Y5W9 270 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 STYXL1Q9Y6J8 313 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ENPP4Q9Y6X5 453 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RIMBP3CA6NJZ7 1639 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RIMBP3BA6NNM3 1639 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR6C76A6NM76 312 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SEPT4O43236 478 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 UMODP07911 640 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC6A8P48029 635 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CAMLGP49069 296 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CDKN2DP55273 166 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SELENOWP63302 87 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FZD5Q13467 585 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CBFBQ13951 182 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 WSCD1Q658N2 575 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 NCBP2-AS2Q69YL0 99 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM91Q6ZNR0 172 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GPRIN1Q7Z2K8 1008 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 LRP10Q7Z4F1 713 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OSCARQ8IYS5 282 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR9K2Q8NGE7 335 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR10W1Q8NGF6 305 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR51S1Q8NGJ8 323 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OR5B3Q8NH48 314 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CXorf40BQ96DE9 158 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 REEP6Q96HR9 211 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF582Q96NG8 517 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 IL4I1Q96RQ9 567 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SELENOIQ9C0D9 397 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 EIF5A2Q9GZV4 153 aaKnown RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GREM2Q9H772 168 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ENTPD2Q9Y5L3 495 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MYH7BA7E2Y1 1941 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TMEM235A6NFC5 223 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 GPR39O43194 453 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF264O43296 627 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 KLK8O60259 260 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CFHP08603 1231 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PHKG2P15735 406 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF7P17097 686 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SDHBP21912 280 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CCND3P30281 292 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC6A11P48066 632 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC11A1P49279 550 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SULT1A2P50226 295 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 EFNA5P52803 228 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 FGF8P55075 233 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 DOK6Q6PKX4 331 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 BTNL8Q6UX41 500 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CLEC20AQ6ZU45 233 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ARHGAP12Q8IWW6 846 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ADAMTS17Q8TE56 1095 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SKA2Q8WVK7 121 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 KTI12Q96EK9 354 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-201ENST00000338963 MASTLQ96GX5 879 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC46A2Q9BY10 475 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 ELOVL4Q9GZR5 314 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 RDH14Q9HBH5 336 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 BEX1Q9HBH7 125 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 PLSCR4Q9NRQ2 329 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CA10Q9NS85 328 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 TVP23BQ9NYZ1 205 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 CACNG4Q9UBN1 327 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 UQCR10Q9UDW1 63 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 IL20RAQ9UHF4 553 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 NEU3Q9UQ49 428 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 OSGIN2Q9Y236 505 aa3.82□□□□□ -1.8
NEDD4-201ENST00000338963 SLC22A31A6NKX4 558 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms