RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SH3GL3Q99963 347 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 BEX2Q9BXY8 128 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 MRPL37Q9BZE1 423 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 BPESC1Q9GZL8 116 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 CHODLQ9H9P2 273 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 GLTPQ9NZD2 209 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 MYEF2Q9P2K5 600 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 TRIM33Q9UPN9 1127 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 SH3GLB1Q9Y371 365 aa11.53□□□□□ -0.56
NUDCD3-201ENST00000338427 LOC100289279A0A1B0GTE1 492 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 LOC390937A0A1W2PQ73 354 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 TRAPPC13A5PLN9 417 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 RNF212BA8MTL3 300 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 BLOC1S5-TXNDC5H3BN57 136 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 FXYD1O00168 92 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 RNF13O43567 381 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 AKAP8O43823 692 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 F13BP05160 661 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 UMPSP11172 480 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 APEHP13798 732 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 DAOP14920 347 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 FUT1P19526 365 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 COL8A2P25067 703 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 UGT2B15P54855 530 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 PIN1Q13526 163 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 MAD2L1BPQ15013 274 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 TRIP10Q15642 601 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 PODNL1Q6PEZ8 512 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 CCDC80Q76M96 950 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 PATL1Q86TB9 770 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 MEX3DQ86XN8 651 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF584Q8IVC4 421 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 PAQR4Q8N4S7 273 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 TSPEARQ8WU66 669 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 LRRC58Q96CX6 371 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF583Q96ND8 569 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF347Q96SE7 839 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 SYT3Q9BQG1 590 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 PIMREGQ9BSJ6 248 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 RAB1BQ9H0U4 201 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF442Q9H7R0 627 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 VIPAS39Q9H9C1 493 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 B3GAT2Q9NPZ5 323 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 NANSQ9NR45 359 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 C20orf141Q9NUB4 165 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 CMAHPQ9Y471 501 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 FKBP7Q9Y680 259 aa11.52□□□□□ -0.57
NUDCD3-201ENST00000338427 LILRA1O75019 489 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 PDE5AO76074 875 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 MT-ATP6P00846 226 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 TGFAP01135 160 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 QDPRP09417 244 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 CSF3P09919 207 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 PAX7P23759 505 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 IGFBP5P24593 272 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 AQP2P41181 271 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 PPOXP50336 477 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 ARFIP2P53365 341 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 CYLC2Q14093 348 aaPredicted RBP11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 ALKBH6Q3KRA9 238 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 SWT1Q5T5J6 900 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 METTL21CQ5VZV1 264 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 REP15Q6BDI9 236 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 ZNF627Q7L945 461 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 CCDC36Q8IYA8 594 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 SYT14Q8NB59 555 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 IL17RDQ8NFM7 739 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 OR6X1Q8NH79 312 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 MOSPD2Q8NHP6 518 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 UBASH3BQ8TF42 649 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 TMEM255BQ8WV15 326 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 C10orf82Q8WW14 230 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 STON2Q8WXE9 905 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 ECSITQ9BQ95 431 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 OR51B6Q9H340 312 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 SAR1AQ9NR31 198 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 FGFR1OP2Q9NVK5 253 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 RIMS3Q9UJD0 308 aa11.51□□□□□ -0.57
NUDCD3-201ENST00000338427 VSTM5A8MXK1 200 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 MRASO14807 208 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 DHHO43323 396 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 PIP5K1CO60331 668 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 HPXP02790 462 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 HIST1H2ABP04908 130 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 FAM157CP0CG43 387 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 YAP1P46937 504 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 GZMKP49863 264 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 TRMT5Q32P41 509 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 DEF8Q6ZN54 512 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 HIST3H2AQ7L7L0 130 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 SNX32Q86XE0 403 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 SLC22A24Q8N4F4 322 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 SPATA3Q8NHX4 192 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 HIST1H2ACQ93077 130 aa11.5□□□□□ -0.57
NUDCD3-201ENST00000338427 MCHR2Q969V1 340 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms