RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ANXA7P20073 488 aaKnown RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 COL9A1P20849 921 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 CTXN1P60606 82 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 CLINT1Q14677 625 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 TCTE1Q5JU00 501 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 FHL5Q5TD97 284 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 C7orf61Q8IZ16 206 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 OR6N2Q8NGY6 317 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 ZNF563Q8TA94 476 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 TM4SF19Q96DZ7 209 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 DGAT2Q96PD7 388 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 ALG12Q9BV10 488 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 SDHAF3Q9NRP4 125 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 ZNF281Q9Y2X9 895 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 KIF26AQ9ULI4 1882 aaPredicted RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 TDRD6O60522 2096 aaKnown RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 IFITM5A6NNB3 132 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 EIF1BO60739 113 aaKnown RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 ZFPL1O95159 310 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 SLC2A5P22732 501 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 EIF1P41567 113 aaKnown RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 RAD52P43351 418 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 DIO1P49895 249 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 Q6ZSR6 202 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 Q6ZTK2 550 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 BMFQ96LC9 184 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 TCEAL2Q9H3H9 227 aaPredicted RBP15.08■□□□□ 0
CDC42EP4-201ENST00000335793 PILRAQ9UKJ1 303 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 DTX4Q9Y2E6 619 aa15.08■□□□□ 0
CDC42EP4-201ENST00000335793 A0A087WV48 116 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 K7EQS6 105 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 HTR3BO95264 441 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 F12P00748 615 aaPredicted RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 IGKV1D-16P01601 117 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 CD63P08962 238 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 UCHL1P09936 223 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 SMIM10L1P0DMW3 83 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 APEHP13798 732 aaKnown RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 DCTDP32321 178 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 ACAA2P42765 397 aaKnown RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 ZDHHC1Q8WTX9 485 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 SMIM10Q96HG1 83 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 PFDN5Q99471 154 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 FKRPQ9H9S5 495 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 MRPS33Q9Y291 106 aaKnown RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 ARPC5O15511 151 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 BTG2P78543 158 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 GAS6Q14393 721 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 OVCH1Q7RTY7 1134 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 C2orf42Q9NWW7 574 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 HAO2Q9NYQ3 351 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 OGG1O15527 345 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 NKX2-2O95096 273 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 SLC35E2P0CK97 266 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 RPS4Y1P22090 263 aaKnown RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 HNRNPA2B1P22626 353 aaKnown RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 ITPKBP27987 946 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 ART1P52961 327 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 CASP6P55212 293 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 OVCH2Q7RTZ1 564 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 SYS1Q8N2H4 156 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 AVL9Q8NBF6 648 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 OR8S1Q8NH09 359 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 OR5AK2Q8NH90 309 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 BAHD1Q8TBE0 780 aaPredicted RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 NKX3-1Q99801 234 aaPredicted RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 PAPOLGQ9BWT3 736 aaKnown RBP15.07■□□□□ 0
CDC42EP4-201ENST00000335793 ULBP3Q9BZM4 244 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 FAM60AQ9NP50 221 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 CHRNA9Q9UGM1 479 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 LAMP5Q9UJQ1 280 aa15.07■□□□□ 0
CDC42EP4-201ENST00000335793 MEIKINA0A087WXM9 373 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 B4DGG1 531 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 CLDN4O14493 209 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 TACSTD2P09758 323 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 KIR2DL1P43626 348 aaPredicted RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 ALG11Q2TAA5 492 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 NHLRC3Q5JS37 347 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 FAM198BQ6UWH4 519 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 RSC1A1Q92681 617 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 C7orf50Q9BRJ6 194 aaKnown RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 TAS2R3Q9NYW6 316 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 ENTPD2Q9Y5L3 495 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 SMAD9O15198 467 aaKnown RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 SC5DO75845 299 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 ST6GAL1P15907 406 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 PLAURQ03405 335 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 KLF9Q13886 244 aaPredicted RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 TMEM255AQ5JRV8 349 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 LIPNQ5VXI9 398 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 BAIAP2L2Q6UXY1 529 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 DMRTC2Q8IXT2 367 aaPredicted RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 OR6S1Q8NH40 331 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 ANKRD9Q96BM1 317 aaPredicted RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 PRTFDC1Q9NRG1 225 aa15.06■□□□□ 0
CDC42EP4-201ENST00000335793 ING1Q9UK53 422 aaPredicted RBP15.06■□□□□ 0
CDC42EP4-201ENST00000335793 A0A0J9YY10 115 aa15.05■□□□□ 0
CDC42EP4-201ENST00000335793 A8MXK9 166 aa15.05■□□□□ 0
CDC42EP4-201ENST00000335793 HIST1H2ABP04908 130 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms