RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CDC40O60508 579 aaKnown RBP eCLIP7.9□□□□□ -1.15
TDP1-201ENST00000335725 GNRHRP30968 328 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 S100A3P33764 101 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 NOVP48745 357 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 POLR2HP52434 150 aaKnown RBP7.9□□□□□ -1.15
TDP1-201ENST00000335725 TAS2R19P59542 299 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 UBE2KP61086 200 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 BCL2L1Q07817 233 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 RUNX2Q13950 521 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 PRRT3Q5FWE3 981 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 RAB41Q5JT25 222 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 SLC25A30Q5SVS4 291 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 SLC35E3Q7Z769 313 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 ZNF738Q8NE65 137 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 STAG3L4Q8TBR4 150 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 TMED6Q8WW62 240 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 ASB17Q8WXJ9 295 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 TMEM18Q96B42 140 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 PPP1R16AQ96I34 528 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 SAMD8Q96LT4 415 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 ZFYVE21Q9BQ24 234 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 C1QTNF2Q9BXJ5 285 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 SLITRK2Q9H156 845 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 MRPS18AQ9NVS2 196 aaKnown RBP7.9□□□□□ -1.15
TDP1-201ENST00000335725 TESQ9UGI8 421 aaKnown RBP7.9□□□□□ -1.15
TDP1-201ENST00000335725 ADAM29Q9UKF5 820 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 STYXL1Q9Y6J8 313 aa7.9□□□□□ -1.15
TDP1-201ENST00000335725 AHDC1Q5TGY3 1603 aaPredicted RBP7.9□□□□□ -1.15
TDP1-201ENST00000335725 SHISA3A0PJX4 238 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MGAT4DA6NG13 374 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 DCTN6O00399 190 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MANBAO00462 879 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TBX18O95935 607 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TOMM40O96008 361 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 ATP1B1P05026 303 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 CCNOP22674 350 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 OR10J1P30954 320 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 CEBPDP49716 269 aaPredicted RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 CLDN18P56856 261 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MAPK14Q16539 360 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 XKR6Q5GH73 641 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 PSAPL1Q6NUJ1 521 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 Q6ZSR9 355 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TTC9BQ8N6N2 239 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TCEANCQ8N8B7 351 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 OR5D16Q8NGK9 328 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 OR52J3Q8NH60 311 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MUCL1Q96DR8 90 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 C20orf24Q9BUV8 137 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 KCNJ16Q9NPI9 418 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 CREBZFQ9NS37 354 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 SLC35D1Q9NTN3 355 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 ZCCHC3Q9NUD5 404 aaKnown RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 IL17CQ9P0M4 197 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 B3GAT1Q9P2W7 334 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 UMAD1C9J7I0 102 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MEIS2O14770 477 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 AMBPP02760 352 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 FAM157CP0CG43 387 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 ACP2P11117 423 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 SCGB1A1P11684 91 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 CD1DP15813 335 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 CDK5Q00535 292 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 IFI44LQ53G44 452 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 BEX5Q5H9J7 111 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 RNF219Q5W0B1 726 aaPredicted RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 IL27RAQ6UWB1 636 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MUC20Q8N307 709 aaPredicted RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 SYT3Q9BQG1 590 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 PBDC1Q9BVG4 233 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TCEAL2Q9H3H9 227 aaPredicted RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 CLMPQ9H6B4 373 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 MRPL15Q9P015 296 aaKnown RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 UPB1Q9UBR1 384 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 FARSAQ9Y285 508 aaKnown RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 PRSS21Q9Y6M0 314 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 ANKUB1A6NFN9 424 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 RNF212BA8MTL3 300 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 A8MVM7 634 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TRGC2P03986 189 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 ELFN1P0C7U0 828 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 PSG6Q00889 435 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 SRSF4Q08170 494 aaKnown RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 OLIG2Q13516 323 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 FAM219BQ5XKK7 198 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 C12orf73Q69YU5 71 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 TNFAIP8L2Q6P589 184 aaPredicted RBP7.89□□□□□ -1.15
TDP1-201ENST00000335725 TEX38Q6PEX7 206 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 LINC01599Q8WXQ3 324 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 C16orf58Q96GQ5 468 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 PARP11Q9NR21 331 aa7.89□□□□□ -1.15
TDP1-201ENST00000335725 RGPD3A6NKT7 1758 aaPredicted RBP7.88□□□□□ -1.15
TDP1-201ENST00000335725 RGPD4Q7Z3J3 1758 aa7.88□□□□□ -1.15
TDP1-201ENST00000335725 PYCARD-AS1I3L0S3 204 aa7.88□□□□□ -1.15
TDP1-201ENST00000335725 IRAK2O43187 625 aa7.88□□□□□ -1.15
TDP1-201ENST00000335725 PMS2P2O95744 297 aa7.88□□□□□ -1.15
TDP1-201ENST00000335725 IL3P08700 152 aa7.88□□□□□ -1.15
TDP1-201ENST00000335725 GRK4P32298 578 aa7.88□□□□□ -1.15
TDP1-201ENST00000335725 ST8SIA6P61647 398 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms