RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC25A30Q5SVS4 291 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 AADACL4Q5VUY2 407 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 C3P1Q6ZMU1 363 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 P4HA3Q7Z4N8 544 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 JAZF1Q86VZ6 243 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 TMEM123Q8N131 208 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 TMEM45BQ96B21 275 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 LRR1Q96L50 414 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 ADAD1Q96M93 576 aaKnown RBP19.08■□□□□ 0.65
TPM1-204ENST00000334895 NMNAT2Q9BZQ4 307 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 DNAJC27Q9NZQ0 273 aa19.08■□□□□ 0.65
TPM1-204ENST00000334895 VSX1Q9NZR4 365 aaPredicted RBP19.08■□□□□ 0.65
TPM1-204ENST00000334895 MBD3L4A6NDZ8 208 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 MBD3L3A6NE82 208 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 MBD3L5A6NJ08 208 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 XKRYO14609 159 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 PRRG2O14669 202 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 MPZL2O60487 215 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 EDNRAP25101 427 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 TLE1Q04724 770 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 GUSBP1Q15486 140 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 SMN1Q16637 294 aaKnown RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 TMEM201Q5SNT2 666 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 CXXC5Q7LFL8 322 aaKnown RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 SYT14Q8NB59 555 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 MBD3L2Q8NHZ7 208 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 NMD3Q96D46 503 aaKnown RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 SLC25A44Q96H78 314 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 SNX18Q96RF0 628 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 SYT4Q9H2B2 425 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 TINAGQ9UJW2 476 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 RCE1Q9Y256 329 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 SLC22A23A1A5C7 686 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 DCTN6O00399 190 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 GPR171O14626 319 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 ENTPD6O75354 484 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 TOXO94900 526 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 YES1P07947 543 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 CLUP10909 449 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 AGTR1P30556 359 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 FMO3P31513 532 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 OCLNQ16625 522 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 CARD17Q5XLA6 110 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 GTF2IRD2BQ6EKJ0 949 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 KRT80Q6KB66 452 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 NIPAL3Q6P499 406 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 GTF2IRD2Q86UP8 949 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 MCEMP1Q8IX19 187 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 OR9Q1Q8NGQ5 310 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 GMPPAQ96IJ6 420 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 ZNF582Q96NG8 517 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 TSSK2Q96PF2 358 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 TP63Q9H3D4 680 aaPredicted RBP19.07■□□□□ 0.64
TPM1-204ENST00000334895 GP6Q9HCN6 339 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 EMC3Q9P0I2 261 aa19.07■□□□□ 0.64
TPM1-204ENST00000334895 ZNF726A6NNF4 738 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 PRR23D1E9PI22 279 aaPredicted RBP19.06■□□□□ 0.64
TPM1-204ENST00000334895 SS18L1O75177 396 aaPredicted RBP19.06■□□□□ 0.64
TPM1-204ENST00000334895 IGHG1P01857 330 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 PRR23D2P0DMB1 279 aaPredicted RBP19.06■□□□□ 0.64
TPM1-204ENST00000334895 RBPJQ06330 500 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 FMODQ06828 376 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 AAED1Q7RTV5 226 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.06■□□□□ 0.64
TPM1-204ENST00000334895 NUFIP2Q7Z417 695 aaKnown RBP19.06■□□□□ 0.64
TPM1-204ENST00000334895 GCNT2Q8N0V5 402 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 NOXO1Q8NFA2 376 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 ZNRF4Q8WWF5 429 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 ZNF566Q969W8 418 aa19.06■□□□□ 0.64
TPM1-204ENST00000334895 RPRD1BQ9NQG5 326 aaKnown RBP19.06■□□□□ 0.64
TPM1-204ENST00000334895 POLEQ07864 2286 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 GYPBP06028 91 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 HOXD4P09016 255 aaPredicted RBP19.05■□□□□ 0.64
TPM1-204ENST00000334895 SLC2A5P22732 501 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 TEKQ02763 1124 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 LGALS3BPQ08380 585 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 HIST3H3Q16695 136 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 PHYHD1Q5SRE7 291 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 C6orf141Q5SZD1 244 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 NXNL2Q5VZ03 156 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 UGT2A3Q6UWM9 527 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 HDDC2Q7Z4H3 204 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 OTULINQ96BN8 352 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 ALG12Q9BV10 488 aa19.05■□□□□ 0.64
TPM1-204ENST00000334895 FOXD3Q9UJU5 478 aaPredicted RBP19.05■□□□□ 0.64
TPM1-204ENST00000334895 NOSIPQ9Y314 301 aaKnown RBP19.05■□□□□ 0.64
TPM1-204ENST00000334895 IGKV1D-43A0A0B4J1Z2 117 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 RENP00797 406 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 CTLA4P16410 223 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 SLC25A1P53007 311 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 NUDT6P53370 316 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 B3GNT6Q6ZMB0 384 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 OR6V1Q8N148 313 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 TMEM54Q969K7 222 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 INTS12Q96CB8 462 aaKnown RBP19.04■□□□□ 0.64
TPM1-204ENST00000334895 TM9SF2Q99805 663 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 NUAK2Q9H093 628 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 GLRX2Q9NS18 164 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 ASB6Q9NWX5 421 aa19.04■□□□□ 0.64
TPM1-204ENST00000334895 FREM1Q5H8C1 2179 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms