RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 CT45A7P0DMV0 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A8P0DMV1 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A9P0DMV2 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 GABRB1P18505 474 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A2Q5DJT8 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A1Q5HYN5 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 NPSR1Q6W5P4 371 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MBOAT2Q6ZWT7 520 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MAVSQ7Z434 540 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 KLHDC1Q8N7A1 406 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 PLPP7Q8NBV4 271 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR4N2Q8NGD1 307 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR5L1Q8NGL2 311 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR52I2Q8NH67 350 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CT45A3Q8NHU0 189 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SHISA4Q96DD7 197 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 VAMP8Q9BV40 100 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SCPEP1Q9HB40 452 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MYH6P13533 1939 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SERTM2A0A1B0GWG4 89 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 TPOP07202 933 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ACKR1Q16570 336 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MRPL2Q5T653 305 aaKnown RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 YOD1Q5VVQ6 348 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 KDM4DQ6B0I6 523 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 TMEM71Q6P5X7 295 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 NANOGP1Q8N7R0 232 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 C12orf76Q8N812 135 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 GPR119Q8TDV5 335 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 PTDSS2Q9BVG9 487 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CHST11Q9NPF2 352 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 FLVCR2Q9UPI3 526 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 INSL6Q9Y581 213 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ADGRB1O14514 1584 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 IGHG1P01857 330 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ELAVL4P26378 380 aaKnown RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CLDN20P56880 219 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 POU3F1Q03052 451 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SAXO2Q658L1 398 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 PRICKLE2Q7Z3G6 844 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 LGI3Q8N145 548 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR51A2Q8NGJ7 313 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR13C8Q8NGS7 320 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 PIGQQ9BRB3 760 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 STRAPQ9Y3F4 350 aaKnown RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CHEK1O14757 476 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MPGP29372 298 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ECI1P42126 302 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 GLYATL3Q5SZD4 288 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 LSMEM2Q8N112 164 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SLC22A24Q8N4F4 322 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 EID2Q8N6I1 236 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 DYNC2LI1Q8TCX1 351 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CDCP1Q9H5V8 836 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 WDR76Q9H967 626 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SLCO3A1Q9UIG8 710 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR52A1Q9UKL2 312 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 RAB22AQ9UL26 194 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 SCML1Q9UN30 329 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 POMT1Q9Y6A1 747 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 POM121BA6NF01 834 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 GABARAPH6UMI1 98 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ITGB7P26010 798 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 FABP9Q0Z7S8 132 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CTSL3PQ5NE16 218 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 ZNF684Q5T5D7 378 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 TMEM184AQ6ZMB5 413 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MBOAT4Q96T53 435 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 NMNAT3Q96T66 252 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 OBP2BQ9NPH6 170 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 TREX1Q9NSU2 369 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 RBPJLQ9UBG7 517 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 CBLCQ9ULV8 474 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MOKQ9UQ07 419 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 GPR55Q9Y2T6 319 aaPredicted RBP9.08□□□□□ -0.96
COL4A6-201ENST00000334504 MROH1Q8NDA8 1641 aa9.08□□□□□ -0.96
COL4A6-201ENST00000334504 TMEM131LA2VDJ0 1609 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 QDPRP09417 244 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 FCGR2CP31995 323 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 TPPP2P59282 170 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 SOX4Q06945 474 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 SERTAD2Q14140 314 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 LTB4RQ15722 352 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 LCN15Q6UWW0 184 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CATSPERDQ86XM0 798 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 RNF113BQ8IZP6 322 aaKnown RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 TCTE3Q8IZS6 198 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 KDF1Q8NAX2 398 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 RPUSD4Q96CM3 377 aaKnown RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 ABHD6Q9BV23 337 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 TUBAL3A6NHL2 446 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 TGM5O43548 720 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 JTBO76095 146 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 ITGB8P26012 769 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 HTR3AP46098 478 aa9.07□□□□□ -0.96
COL4A6-201ENST00000334504 SNRPEP62304 92 aaKnown RBP9.07□□□□□ -0.96
COL4A6-201ENST00000334504 CDONQ4KMG0 1287 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms