RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DLX5P56178 289 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 RPS18P62269 152 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 ELOAQ14241 798 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 GK2Q14410 553 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 SHBQ15464 509 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 FAM27D1Q5T7N8 215 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 OR5M10Q6IEU7 315 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 MEPCEQ7L2J0 689 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 VASH2Q86V25 355 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 GTPBP8Q8N3Z3 284 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 C7orf50Q9BRJ6 194 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 NDUFB11Q9NX14 153 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 ANKRD10Q9NXR5 420 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 KCNN3Q9UGI6 736 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 TRDV1A0A1B0GX56 115 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 CASC3O15234 703 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 APEHP13798 732 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 PRSS3P35030 304 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 SNRPGP62308 76 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 PRAMEF20Q5VT98 475 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 RPL13AP3Q6NVV1 102 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 MED25Q71SY5 747 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 P4HA3Q7Z4N8 544 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF454Q8N9F8 522 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 LGALS14Q8TCE9 139 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 RBPMSQ93062 196 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 C10orf90Q96M02 699 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 OTOGLQ3ZCN5 2332 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 RANBP2P49792 3224 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 CIB4A0PJX0 185 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 TVP23AA6NH52 213 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 FOXS1O43638 330 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 SCGNO76038 276 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 PLGP00747 810 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 TRHRP34981 398 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 SORDQ00796 357 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 RNASE10Q5GAN6 216 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 SIGIRRQ6IA17 410 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 BAIAP2L2Q6UXY1 529 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 PRICKLE2Q7Z3G6 844 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 OR2Y1Q8NGV0 311 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 OR14L1PQ8NHC6 308 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 C16orf52Q8NHV5 167 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 BRIX1Q8TDN6 353 aaKnown RBP10.78□□□□□ -0.68
HDAC6-201ENST00000334136 DUSP19Q8WTR2 217 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 SFXN2Q96NB2 322 aa10.78□□□□□ -0.68
HDAC6-201ENST00000334136 A0A087WUU8 490 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 ARPC4-TTLL3A0A0A6YYG9 625 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 WRBO00258 174 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF14P17017 642 aaPredicted RBP10.77□□□□□ -0.68
HDAC6-201ENST00000334136 FRKP42685 505 aaPredicted RBP10.77□□□□□ -0.68
HDAC6-201ENST00000334136 CYB561P49447 251 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 DUSP5Q16690 384 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 TOR2AQ5JU69 321 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 FAM122CQ6P4D5 195 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 KCTD20Q7Z5Y7 419 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 ABHD4Q8TB40 342 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 SMAP2Q8WU79 429 aaPredicted RBP10.77□□□□□ -0.68
HDAC6-201ENST00000334136 SARGQ9BW04 601 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 ZNF700Q9H0M5 742 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 CCDC86Q9H6F5 360 aaKnown RBP10.77□□□□□ -0.68
HDAC6-201ENST00000334136 NPFFR2Q9Y5X5 522 aa10.77□□□□□ -0.68
HDAC6-201ENST00000334136 TOR1AO14656 332 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 HYAL3O43820 417 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SLC2A10O95528 541 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 UBL4AP11441 157 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 FGF5P12034 268 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 NFYAP23511 347 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 HLA-DMAP28067 261 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 EIF5AP63241 154 aaKnown RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 INSM1Q01101 510 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 CRMP1Q14194 572 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SSPNQ14714 243 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 GLT8D1Q68CQ7 371 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 PRSS33Q8NF86 280 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 TMEM43Q9BTV4 400 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 DUSP22Q9NRW4 184 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 GPR27Q9NS67 375 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 QPCTLQ9NXS2 382 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 VDAC3Q9Y277 283 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SLC35A3Q9Y2D2 325 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 A0A087WV62 115 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 A0A0A6YYJ9 748 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 MAGEB4O15481 346 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 PRAF2O60831 178 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF20P17024 532 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 PPICP45877 212 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 EVX1P49640 407 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SSX1Q16384 188 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SSX6Q7RTT6 188 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF546Q86UE3 836 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 OR5AK2Q8NH90 309 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 TMEM255BQ8WV15 326 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 TM4SF19Q96DZ7 209 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 FCRL1Q96LA6 429 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 FOXN4Q96NZ1 517 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 GPR87Q9BY21 358 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SLC23A1Q9UHI7 598 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms