RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RHCGQ9UBD6 479 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 EGFL7Q9UHF1 273 aa24.04■■□□□ 1.44
ATPAF1-201ENST00000329231 VPS13CQ709C8 3753 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 MCIDASD6RGH6 385 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 H7C1Q1 480 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 J3KTA2 159 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 IGHG1P01857 330 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 F13BP05160 661 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 IFI30P13284 250 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 AQP2P41181 271 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 SAMD4BQ5PRF9 694 aaKnown RBP24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 C11orf71Q6IPW1 123 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 MDP1Q86V88 176 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 CYP4Z1Q86W10 505 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 BPIFA2Q96DR5 249 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 COX4I2Q96KJ9 171 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 BARX1Q9HBU1 254 aaPredicted RBP24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 MAN2C1Q9NTJ4 1040 aa24.03■■□□□ 1.44
ATPAF1-201ENST00000329231 TRIM64A6NGJ6 449 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 TRIM64BA6NI03 449 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 FFAR1O14842 300 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 PIP5K1CO60331 668 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 TSPAN19P0C672 248 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 PGA4P0DJD7 388 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 PGA3P0DJD8 388 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 BMP4P12644 408 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 B4GALT1P15291 398 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 DAP3P51398 398 aaKnown RBP24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 IDH3GP51553 393 aaPredicted RBP24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 DEFB107AQ8IZN7 70 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 RNF148Q8N7C7 305 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 NANOS1Q8WY41 292 aaKnown RBP24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 CDRT15Q96T59 188 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 CACNG6Q9BXT2 260 aa24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 GSX1Q9H4S2 264 aaPredicted RBP24.02■■□□□ 1.44
ATPAF1-201ENST00000329231 ZNF503-AS2A6NEH8 195 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 B2RBV5 119 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 ENTPD5O75356 428 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 IGHV4-39P01824 125 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 HSD17B1P14061 328 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 CALB2P22676 271 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 CLRN1P58418 232 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 CHRNB3Q05901 458 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 NPRL3Q12980 569 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 CLEC12BQ2HXU8 276 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 PIWIL3Q7Z3Z3 882 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 RNF113BQ8IZP6 322 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 IL17RDQ8NFM7 739 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 OR4F15Q8NGB8 312 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 DCAF13Q9NV06 445 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 B3GNT2Q9NY97 397 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 STX18Q9P2W9 335 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 SAMD4AQ9UPU9 718 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 ENPP4Q9Y6X5 453 aa24.01■■□□□ 1.43
ATPAF1-201ENST00000329231 FAM171A2A8MVW0 826 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 CENPBD1B2RD01 187 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 HLA-HP01893 362 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 CELA3BP08861 270 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 CD79AP11912 226 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 GSG1Q2KHT4 349 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 SPATS1Q496A3 300 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 LRFN4Q6PJG9 635 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 ZNF730Q6ZMV8 503 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 NRMQ8IXM6 262 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 CIARTQ8N365 385 aaPredicted RBP24■■□□□ 1.43
ATPAF1-201ENST00000329231 MOSPD2Q8NHP6 518 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 ASB10Q8WXI3 467 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 ACOT11Q8WXI4 607 aaPredicted RBP24■■□□□ 1.43
ATPAF1-201ENST00000329231 DENND2DQ9H6A0 471 aaPredicted RBP24■■□□□ 1.43
ATPAF1-201ENST00000329231 SEC61A2Q9H9S3 476 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 CD300AQ9UGN4 299 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 HIF3AQ9Y2N7 669 aa24■■□□□ 1.43
ATPAF1-201ENST00000329231 FAM32AQ9Y421 112 aaKnown RBP24■■□□□ 1.43
ATPAF1-201ENST00000329231 DHHO43323 396 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 PRSS23O95084 383 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 QDPRP09417 244 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 SAGP10523 405 aaPredicted RBP23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 FUT4P22083 530 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 LSM11P83369 360 aaKnown RBP eCLIP23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 PRKCDQ05655 676 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 LAPTM4AQ15012 233 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 FXNQ16595 210 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 CDK20Q8IZL9 346 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 FAM156AQ8NDB6 213 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 RBM15BQ8NDT2 890 aaKnown RBP23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 ANKRD19PQ9H560 264 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 GORASP2Q9H8Y8 452 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 CA10Q9NS85 328 aa23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 GDF2Q9UK05 429 aaPredicted RBP23.99■■□□□ 1.43
ATPAF1-201ENST00000329231 NPIPB13A6NJU9 1138 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 NPIPB4C9JG80 1138 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 SMAD7O15105 426 aaKnown RBP23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 NDUFS7O75251 213 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 T-ENOLP0DO92 83 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 TCN1P20061 433 aaPredicted RBP23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 CALCRP30988 508 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 TAF11Q15544 211 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 HIST3H3Q16695 136 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 ANKDD1AQ495B1 522 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 ALG10Q5BKT4 473 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms