RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 ZNF613Q6PF04 617 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 GLCCI1Q86VQ1 547 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 COMTD1Q86VU5 262 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 FUNDC1Q8IVP5 155 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 SMYD1Q8NB12 490 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 SLC7A8Q9UHI5 535 aa20.09■□□□□ 0.81
TMEM54-201ENST00000329151 B4DSR2 109 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 RNF13O43567 381 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 GPX2P18283 190 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 ALDH3B1P43353 468 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 NKPD1Q17RQ9 610 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 SHQ1Q6PI26 577 aaKnown RBP20.08■□□□□ 0.81
TMEM54-201ENST00000329151 TTC33Q6PID6 262 aaPredicted RBP20.08■□□□□ 0.81
TMEM54-201ENST00000329151 ZNF627Q7L945 461 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 PIWIL3Q7Z3Z3 882 aaKnown RBP20.08■□□□□ 0.81
TMEM54-201ENST00000329151 SLC26A7Q8TE54 656 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 RDH5Q92781 318 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 EBF4Q9BQW3 602 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 OCEL1Q9H607 264 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 RNF121Q9H920 327 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 ZNF446Q9NWS9 450 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 METRNQ9UJH8 293 aa20.08■□□□□ 0.81
TMEM54-201ENST00000329151 LEF1Q9UJU2 399 aaPredicted RBP20.08■□□□□ 0.81
TMEM54-201ENST00000329151 LRRN3E7EW58 273 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 M0R3H8 397 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 CHP2O43745 196 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 FMO6PO60774 539 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 UMPSP11172 480 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 ZNF35P13682 527 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 ATP4BP51164 291 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 DVL1P1P54792 670 aaPredicted RBP20.07■□□□□ 0.8
TMEM54-201ENST00000329151 RAB39AQ14964 217 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 TMEM53Q6P2H8 277 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 SLC35D2Q76EJ3 337 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 C10orf111Q8N326 155 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 SNX33Q8WV41 574 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 ZNF566Q969W8 418 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 NARFLQ9H6Q4 476 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 CDH20Q9HBT6 801 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 NANSQ9NR45 359 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 FZR1Q9UM11 496 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 GRIP1Q9Y3R0 1128 aa20.07■□□□□ 0.8
TMEM54-201ENST00000329151 SLC22A23A1A5C7 686 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 CPSF4LA6NMK7 179 aaKnown RBP20.06■□□□□ 0.8
TMEM54-201ENST00000329151 ANGPT2O15123 496 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 MFN2O95140 757 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 OR8G3PP0DMU2 310 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 SAGP10523 405 aaPredicted RBP20.06■□□□□ 0.8
TMEM54-201ENST00000329151 ACHEP22303 614 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 RBBP4Q09028 425 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 RGS7BPQ6MZT1 257 aaPredicted RBP20.06■□□□□ 0.8
TMEM54-201ENST00000329151 DHDDSQ86SQ9 333 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 SLC30A8Q8IWU4 369 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 IKZF5Q9H5V7 419 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 SLCO1B3Q9NPD5 702 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 INTS9Q9NV88 658 aaKnown RBP20.06■□□□□ 0.8
TMEM54-201ENST00000329151 GLTPQ9NZD2 209 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 GMEB1Q9Y692 573 aa20.06■□□□□ 0.8
TMEM54-201ENST00000329151 PPIHO43447 177 aaKnown RBP20.05■□□□□ 0.8
TMEM54-201ENST00000329151 CH25HO95992 272 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 OPN1SWP03999 348 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 MAD2L1BPQ15013 274 aaPredicted RBP20.05■□□□□ 0.8
TMEM54-201ENST00000329151 SLC22A24Q8N4F4 322 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 OR6X1Q8NH79 312 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 VANGL1Q8TAA9 524 aaPredicted RBP20.05■□□□□ 0.8
TMEM54-201ENST00000329151 CPPED1Q9BRF8 314 aaPredicted RBP20.05■□□□□ 0.8
TMEM54-201ENST00000329151 ZNF416Q9BWM5 594 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 LRMDAQ9H2I8 198 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 C1orf198Q9H425 327 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 NDUFAF1Q9Y375 327 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 ANK2Q01484 3957 aa20.05■□□□□ 0.8
TMEM54-201ENST00000329151 TRBV5-3A0A0A0MS03 114 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 MCIDASD6RGH6 385 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 KPNA4O00629 521 aaPredicted RBP20.04■□□□□ 0.8
TMEM54-201ENST00000329151 PTHP01270 115 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 TFP02787 698 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 HPXP02790 462 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 SERPINA5P05154 406 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 CLRN1P58418 232 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 PLP2Q04941 152 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 ENTPD8Q5MY95 495 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 TMEM154Q6P9G4 183 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 NANOGNBQ7Z5D8 188 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 DPPA2Q7Z7J5 298 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 PATL1Q86TB9 770 aaKnown RBP20.04■□□□□ 0.8
TMEM54-201ENST00000329151 SLC30A7Q8NEW0 376 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 ARHGDIGQ99819 225 aa20.04■□□□□ 0.8
TMEM54-201ENST00000329151 RSPO3Q9BXY4 272 aaPredicted RBP20.04■□□□□ 0.8
TMEM54-201ENST00000329151 M0QX08 132 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 TPST2O60704 377 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 CD247P20963 164 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 ZNF84P51523 738 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 SEC24CP53992 1094 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 TMEM33P57088 247 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 SLC36A2Q495M3 483 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 RUNDC3AQ59EK9 446 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 ELFN2Q5R3F8 820 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 INTS11Q5TA45 600 aaKnown RBP20.03■□□□□ 0.8
TMEM54-201ENST00000329151 SKA3Q8IX90 412 aa20.03■□□□□ 0.8
TMEM54-201ENST00000329151 ICA1LQ8NDH6 482 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms