RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 INTS14Q96SY0 518 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 LPAR4Q99677 370 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 FBXL3Q9UKT7 428 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 C2orf72A6NCS6 295 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 CTNSO60931 367 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 AKR7A3O95154 331 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 POU3F2P20265 443 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 GNALP38405 381 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 MELKQ14680 651 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 STPG1Q5TH74 334 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 WBP2NLQ6ICG8 309 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 TSLPQ969D9 159 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 FRRS1LQ9P0K9 344 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 CGGBP1Q9UFW8 167 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 MRM2Q9UI43 246 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 FBXL2Q9UKC9 423 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 FOXJ3Q9UPW0 622 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 PCDHGA5Q9Y5G8 931 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 EFCAB7A8K855 629 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 M0QYG6 137 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 LGALS8O00214 317 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 SC5DO75845 299 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 CT45A8P0DMV1 189 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 CT45A9P0DMV2 189 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 APEHP13798 732 aaKnown RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 NFYAP23511 347 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 DNASE1L1P49184 302 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 GFERP55789 205 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 ZP2Q05996 745 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 C19orf57Q0VDD7 668 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 CT45A2Q5DJT8 189 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 RGP1Q92546 391 aaPredicted RBP11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 KLHL15Q96M94 604 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 RBP7Q96R05 134 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 PFDN2Q9UHV9 154 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 SERTAD3Q9UJW9 196 aa11.73□□□□□ -0.53
HMGCS1-201ENST00000325110 KIF26AQ9ULI4 1882 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 ZNF264O43296 627 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 TNFSF14O43557 240 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 PRAF2O60831 178 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 RP2O75695 350 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 ADAM8P78325 824 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 SORDQ00796 357 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 SPOCK1Q08629 439 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 NKAIN2Q5VXU1 208 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 OR4D10Q8NGI6 311 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 OR4C16Q8NGL9 310 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 UBQLN4Q9NRR5 601 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 CKLFQ9UBR5 152 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 RAB40ALP0C0E4 278 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 GAAP10253 952 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 EFNB2P52799 333 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 FOXL2P58012 376 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 GMFBP60983 142 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 DLX2Q07687 328 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 LIN54Q6MZP7 749 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC16A9Q7RTY1 509 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 TMEM151BQ8IW70 566 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 OR6V1Q8N148 313 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 SDR16C5Q8N3Y7 309 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 OR2G2Q8NGZ5 317 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 RAB40AQ8WXH6 277 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 FAM46BQ96A09 425 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 KLHDC7BQ96G42 594 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 SEMA6CQ9H3T2 930 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 POLE3Q9NRF9 147 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 PRODH2Q9UF12 536 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 C5orf67F2Z3F1 127 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 UTS2O95399 124 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 CD2P06729 351 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 ADRA2CP18825 462 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 PRSS3P35030 304 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 AANATQ16613 207 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 MARCH3Q86UD3 253 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 DND1Q8IYX4 353 aaKnown RBP11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 LSMEM1Q8N8F7 131 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 SORCS2Q96PQ0 1159 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 DHRS9Q9BPW9 319 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 KLHDC3Q9BQ90 382 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 MED11Q9P086 117 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 POLR1DQ9Y2S0 133 aa11.72□□□□□ -0.53
HMGCS1-201ENST00000325110 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 OPN1LWP04000 364 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 CD3DP04234 171 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 AMY2AP04746 511 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 DPP4P27487 766 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 KIR2DS5Q14953 304 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 ZNF74Q16587 644 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 GFOD2Q3B7J2 385 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 SLC6A19Q695T7 634 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 TEX19Q8NA77 164 aa11.71□□□□□ -0.53
HMGCS1-201ENST00000325110 CASTOR1Q8WTX7 329 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms