RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 MCHR1Q99705 422 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 ZNF426Q9BUY5 554 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 EMC6Q9BV81 110 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 ASPNQ9BXN1 380 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 C1orf21Q9H246 121 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 TAS2R5Q9NYW4 299 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 ZNF224Q9NZL3 707 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 SELENONQ9NZV5 590 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 USP22Q9UPT9 525 aa13.47□□□□□ -0.25
FOXR1-201ENST00000317011 LOC390937A0A1W2PQ73 354 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 ERICH4A6NGS2 130 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 M0R3G1 203 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 CHP2O43745 196 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 IGHV4-31P0DP07 118 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 ZNF35P13682 527 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 THBS4P35443 961 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 NR4A2P43354 598 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 PPOXP50336 477 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 PDLIM4P50479 330 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 RASSF2P50749 326 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 SNRPD2P62316 118 aaKnown RBP13.46□□□□□ -0.25
FOXR1-201ENST00000317011 LSM11P83369 360 aaKnown RBP eCLIP13.46□□□□□ -0.25
FOXR1-201ENST00000317011 POU3F1Q03052 451 aaPredicted RBP13.46□□□□□ -0.25
FOXR1-201ENST00000317011 PMS2P3Q13401 168 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 DNAL1Q4LDG9 190 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 PODNL1Q6PEZ8 512 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 RBM45Q8IUH3 476 aaKnown RBP13.46□□□□□ -0.25
FOXR1-201ENST00000317011 SLC30A8Q8IWU4 369 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 OR5J2Q8NH18 312 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 FOXN4Q96NZ1 517 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 BTBD10Q9BSF8 475 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 DENND2DQ9H6A0 471 aaPredicted RBP13.46□□□□□ -0.25
FOXR1-201ENST00000317011 MYOZ1Q9NP98 299 aaPredicted RBP13.46□□□□□ -0.25
FOXR1-201ENST00000317011 MED29Q9NX70 200 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 ABCD2Q9UBJ2 740 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.25
FOXR1-201ENST00000317011 FAM220BPB1ANY3 271 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 M0R3H8 397 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 NQO1P15559 274 aaKnown RBP13.45□□□□□ -0.26
FOXR1-201ENST00000317011 NR4A1P22736 598 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 PCGF2P35227 344 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 GSK3BP49841 420 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 IDH3GP51553 393 aaPredicted RBP13.45□□□□□ -0.26
FOXR1-201ENST00000317011 ZNF74Q16587 644 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 CHRFAM7AQ494W8 412 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 ENTPD8Q5MY95 495 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 PATL1Q86TB9 770 aaKnown RBP13.45□□□□□ -0.26
FOXR1-201ENST00000317011 CALHM3Q86XJ0 350 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 OR6X1Q8NH79 312 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 TMEM54Q969K7 222 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 TAMM41Q96BW9 452 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 KCTD14Q9BQ13 255 aaPredicted RBP13.45□□□□□ -0.26
FOXR1-201ENST00000317011 THTPAQ9BU02 230 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 LRMDAQ9H2I8 198 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 AP3M1Q9Y2T2 418 aa13.45□□□□□ -0.26
FOXR1-201ENST00000317011 ZNF726A6NNF4 738 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 VSTM5A8MXK1 200 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 ASAH2BP0C7U1 165 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 ZNF14P17017 642 aaPredicted RBP13.44□□□□□ -0.26
FOXR1-201ENST00000317011 TCN1P20061 433 aaPredicted RBP13.44□□□□□ -0.26
FOXR1-201ENST00000317011 NPR2P20594 1047 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 GIFP27352 417 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 THBS2P35442 1172 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 EVX1P49640 407 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 CAMK2DQ13557 499 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 VMACQ2NL98 169 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 SAMD4BQ5PRF9 694 aaKnown RBP13.44□□□□□ -0.26
FOXR1-201ENST00000317011 LRFN4Q6PJG9 635 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 FAM156AQ8NDB6 213 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 OR2T12Q8NG77 320 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 ADAMTS16Q8TE57 1224 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 MPP4Q96JB8 637 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 CLPTM1LQ96KA5 538 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 ZNF583Q96ND8 569 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 PRSS27Q9BQR3 290 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 SLC19A3Q9BZV2 496 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 NOX3Q9HBY0 568 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 CDC42EP3Q9UKI2 254 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
FOXR1-201ENST00000317011 FKBP7Q9Y680 259 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 MXRA5Q9NR99 2828 aa13.44□□□□□ -0.26
FOXR1-201ENST00000317011 TRAPPC13A5PLN9 417 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 DNAJC8O75937 253 aaPredicted RBP13.43□□□□□ -0.26
FOXR1-201ENST00000317011 STAMBPO95630 424 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 IFNA2P01563 188 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 HLA-HP01893 362 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 OPN1SWP03999 348 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 FAM157CP0CG43 387 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 GZMKP49863 264 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 MSMPQ1L6U9 139 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 CARD17Q5XLA6 110 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 VHLLQ6RSH7 139 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 ZNF813Q6ZN06 617 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 PIWIL3Q7Z3Z3 882 aaKnown RBP13.43□□□□□ -0.26
FOXR1-201ENST00000317011 ZNF540Q8NDQ6 660 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 RNF217Q8TC41 542 aa13.43□□□□□ -0.26
FOXR1-201ENST00000317011 NEU4Q8WWR8 484 aaPredicted RBP13.43□□□□□ -0.26
FOXR1-201ENST00000317011 MCUR1Q96AQ8 359 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms