RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 SLC46A1Q96NT5 459 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 TEAD3Q99594 435 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 GAL3ST1Q99999 423 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 PDCD1LG2Q9BQ51 273 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 FGF20Q9NP95 211 aaPredicted RBP6.9□□□□□ -1.3
TRIM55-202ENST00000315962 ASB6Q9NWX5 421 aa6.9□□□□□ -1.3
TRIM55-202ENST00000315962 LNP1A1A4G5 178 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 SEC14L5O43304 696 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 RGS9O75916 674 aaPredicted RBP6.9□□□□□ -1.31
TRIM55-202ENST00000315962 SIX6O95475 246 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 ANXA3P12429 323 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 FOSL1P15407 271 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 ATF1P18846 271 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 IL11P20809 199 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 PTGS2P35354 604 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 THBS2P35442 1172 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 PITPNBP48739 271 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 CENPAP49450 140 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 VEGFCP49767 419 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 ZP1P60852 638 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 LTBQ06643 244 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 BTN1A1Q13410 526 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 CD200R1LQ6Q8B3 271 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 FAM198BQ6UWH4 519 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 RTL4Q6ZR62 310 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 LINC00471Q8N535 108 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF433Q8N7K0 673 aaPredicted RBP6.9□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF511Q8NB15 262 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 ZBTB44Q8NCP5 570 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 OR5W2Q8NH69 310 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 TIMP4Q99727 224 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 MED18Q9BUE0 208 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 TEX12Q9BXU0 123 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 TRIM2Q9C040 744 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 HEXA-AS1Q9H8Q6 139 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 KRCC1Q9NPI7 259 aaPredicted RBP6.9□□□□□ -1.31
TRIM55-202ENST00000315962 MKKSQ9NPJ1 570 aaPredicted RBP6.9□□□□□ -1.31
TRIM55-202ENST00000315962 SUSD2Q9UGT4 822 aa6.9□□□□□ -1.31
TRIM55-202ENST00000315962 A0A087WUJ7 227 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 OR6C68A6NDL8 312 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RIIAD1A6NNX1 92 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 KDM4EB2RXH2 506 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 M0R296 226 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 DCTN6O00399 190 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 PTP4A3O75365 173 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 IL33O95760 270 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 DHFRP00374 187 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 HLA-DQB1P01920 261 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RAF1P04049 648 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ALDOBP05062 364 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 SLC36A2Q495M3 483 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 STPG1Q5TH74 334 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 NHLRC1Q6VVB1 395 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 TMPRSS11FQ6ZWK6 438 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 LINGO2Q7L985 606 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF550Q7Z398 422 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 PRSS42Q7Z5A4 293 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ANKRD37Q7Z713 158 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 LUZP2Q86TE4 346 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 WDR5BQ86VZ2 330 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 LSMEM1Q8N8F7 131 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 OR52B4Q8NGK2 314 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 TAAR8Q969N4 342 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 CREB3L1Q96BA8 519 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RBP7Q96R05 134 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 GHITMQ9H3K2 345 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RDH8Q9NYR8 311 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RCE1Q9Y256 329 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 B3GALT1Q9Y5Z6 326 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ATMQ13315 3056 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 TVP23AA6NH52 213 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 H3BUI4 141 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF593O00488 134 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 GPR171O14626 319 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 SELENOFO60613 162 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 RCBTB2O95199 551 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 MPLP40238 635 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 TSPAN5P62079 268 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ACY1Q03154 408 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 TIGD3Q6B0B8 471 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 SLC25A25Q6KCM7 469 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ALKAL2Q6UX46 152 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 GRAMD2AQ8IUY3 354 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 LNX2Q8N448 690 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ACBD7Q8N6N7 88 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 BOLLQ8N9W6 283 aaKnown RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 GALNT6Q8NCL4 622 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 OR10G3Q8NGC4 313 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ZNF671Q8TAW3 534 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 HOXB13Q92826 284 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 KIAA1143Q96AT1 154 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 SGTBQ96EQ0 304 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 MVB12AQ96EY5 273 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ZC3HAV1LQ96H79 300 aaKnown RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 CXorf58Q96LI9 332 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 JSRP1Q96MG2 331 aaPredicted RBP6.89□□□□□ -1.31
TRIM55-202ENST00000315962 OR14A2Q96R54 314 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 DPAGT1Q9H3H5 408 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 ANKRD19PQ9H560 264 aa6.89□□□□□ -1.31
TRIM55-202ENST00000315962 C12orf4Q9NQ89 552 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms